Table 1. Parameters of nucleotide diversity in the regulatory region and the beginning of the structural part of the Lim3A.
Region | Nucleotide position | Number of Indels +SNPs | π (s. d.) | θ (s. d.) |
All sequence | 1–2094 | 16+74 | 0.00709 (0.00046) | 0.00864 (0.00098) |
Regulatory region | 1–1557 | 14+58 | 0.00795 (0.00046) | 0.00875 (0.00112) |
1–779 | 8+39 | 0.01168 (0.00069) | 0.01118 (0.00179) | |
780–1557 | 6+19 | 0.00421 (0.00043) | 0.00631 (0.00135) | |
Exon | 1558–1966 | 1+7 | 0.00152 (0.00059) | 0.00600 (0.00181) |
5′UTR | 1558–1857 | 1+5 | 0.00181 (0.00078) | 0.00670 (0.00223) |
Translated region | 1858–1966 | 0+2 | 0.00073 (0.00070) | 0.00410 (0.00290) |
Intron | 1967–2094 | 1+9 | 0.01443 (0.00131) | 0.01570 (0.00523) |
Numbers of nucleotides in the second column correspond to the standard sequence, regardless indel variation in the natural population.