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. 2009 Jul 6;37(16):5365–5377. doi: 10.1093/nar/gkp493

Figure 3.

Figure 3.

BAF and LRR of chromosome 13 of TCGA sample 02_0114, as well as the results of genoCNA with three different setups in terms whether we assume tissue contamination and whether to use genotype from normal tissue. When copy number is 3, two colors ‘orange’ and ‘dark red’ indicate States 5 and 6 of genoCNA, respectively.