Table 1.
Comparison of the conserved 3'- and 5'-noncoding ends of the vRNA segments from influenza C/JJ/50 virus.
| Segment | 3' nc end (ultimate 20 nucleotides)a | 5' nc end (first 20 nucleotides)a |
|---|---|---|
| PB2b | UCCAAUCCUCUGCUUCUGCU | AGCAGUAGCAAGAGGAUUUU |
| PB1b | CAUAAUCCUCUGCUUCUGCU | AGCAGUAGCAAGAGGAUUUU |
| P3 | UCGGAUCCCCUGCUUCUGCU | AGCAGUAGCAAGGGGAUUUU |
| HEF | AUUAAACCCCUGCUUCUGCU | AGCAGUAGCAAGGGGAUUUU |
| NPb | CAAAAUCUCCUGCUUCUGCU | AGCAGUAGCAAGGAGAUUUU |
| M | AGAAAUCCCCUGCUUCUGCU | AGCAGUAGCAAGGGGAUUUU |
| NSb | AAAGUACCCCUGCUUCUGCU | AGCAGGAGCAAGGGGUUUUU |
a
Underlined: Conserved sequences.
b
In bold: Variations at positions 12, 13, 6', 13' and 14'.
Note that sequences are shown in 5'-3' orientation and numbering of nucleotides starts from both ends.