Table S1.
Transcript and protein variants for mouse Cpeb1. Each mRNA corresponds to the protein in the same row. The translation is regarded as “disconnected” when none of the 6 frames gives continuous read. The translation is considered “fragmented” if it starts with the first codon which is not a Methionine, or terminates at the last codon which is not a stop codon. The asterisk * indicates that the protein sequence is not documented in any database but is derived from a theoretical translation of cDNA using Vector NTI software. cDNAs highlighted in grey are used for comparison.
| mRNA | Size (bp) | Description | Protein | Size (aa) | Comments |
|---|---|---|---|---|---|
| AK077799.1 | 1737 | Mus musculus adult male thymus cDNA | BAC37017.1 | 140 (422–561) | Fragmented |
| AK207851.1 | 402 | Mus musculus cDNA | – | Disconnected translation | |
| AK199617.1 | 379 | Mus musculus cDNA | – | Disconnected translation | |
| AK136088.1 | 2697 | Mus musculus in vitro fertilized eggs cDNA product:cytoplasmic polyadenylation element binding protein 1, full insert sequence | Translated* | 561 | Possibly misreading of 1 nucleotide; otherwise gives identical product as NP_031781 |
| AK135615.1 | 814 | Mus musculus in vitro fertilized eggs cDNA, product:cytoplasmic polyadenylation element binding protein 1, full insert sequence | – | Disconnected translation | |
| BC125476.1 | 1777 | Mus musculus cytoplasmic polyadenylation element binding protein 1, mRNA, complete cds | AAI25477.1 | 562 | 1-aa insertion compared to NP_031781 |
| BC144948.1 | 1759 | Mus musculus cDNA | Translated* | 556 | 5-aa deletion (PKGNM) compared to NP_031781 |
| Y08260.1 | 2610 | M.musculus mRNA for CPEB protein | CAA69588.1 | 561 | |
| NM_007755.4 | 2612 | Mus musculus cytoplasmic polyadenylation element binding protein 1 (cpeb1), mRNA | NP_031781.1 | 561 |