Table S3.
Transcript and protein variants for mouse Cpeb2. Each mRNA corresponds to the protein in the same row. The translation is considered “fragmented” if it starts with the first codon which is not a Methionine, or terminates at the last codon which is not a stop codon. The asterisk * indicates that the protein sequence is not documented in any database but is derived from a theoretical translation of cDNA using Vector NTI software. cDNAs highlighted in grey are used for comparison.
| mRNA | Size (bp) | Description | Protein | Size (aa) | Comments |
|---|---|---|---|---|---|
| AK076221.1 | 4536 | Mus musculus 15 days embryo head cDNA, | Translated* | 189 | Fragmented |
| AK042065.1 | 2629 | Mus musculus 3 days neonate thymus cDNA, | Translated* | 30-aa deletion, 8-aa insertion compared to NP_787951 | |
| AB100307.1 | 1942 | Mus musculus cpeb2 mRNA, complete cds | BAC57076.1 | 521 | |
| NM_175937.2 | 1942 | Mus musculus cytoplasmic polyadenylation element binding protein 2 (cpeb2), mRNA | NP_787951.1 | 521 | |
| AK164866.1 | 904 | Mus musculus 15 days embryo head cDNA, | 89 | Fragmented | |
| AK154330.1 | 3576 | Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, | – | Disconnected translation | |
| BC107349.1 | 1801 | Mus musculus cytoplasmic polyadenylation element binding protein 2, mRNA | AAI07350.1 | 521 | 3-nt deletion in 5′ UTR |
| BC107350.1 | 1801 | Mus musculus cytoplasmic polyadenylation element binding protein 2, mRNA | AAI07351.1 | 521 | 3-nt deletion in 5′ UTR |