Table 3. Comparisons of current GC content and GCeq for five clonal pathogen lineages.
Clonal pathogen | Current GC intergenic | GCeq intergenic a | Current GC non-synonymous | GCeq non-synonymous a | Current GC synonymous | GCeq synonymous a |
Bacillus anthracis | 32.5 | 34(29.2, 38.9) | 39.5 | 26.5(21.3, 32.2) | 23.4 | 30.8(23.8, 40) |
Salmonella typhi | 46.1 | 22.8(17.8. 27.8) | 50.1 | 23.8(21.2, 26.6) | 62.3 | 18.6(15.7, 22.8) |
Yersinia pestis | 42.5 | 27.8(20.2, 36.3) | 48.1 | 24.1(19.8, 29) | 51.7 | 25.4(18.9, 32.7) |
Burkholderia mallei | 67.8 | 48.3(29, 63.3) | 61.1 | 16.2(5.3, 26.6) | 90.5 | 29.9(0, 54) |
MTBC | 62.8 | Missing data | 60.8 | 41.5(33.8, 48.5) | 80.2 | 41.6(29.1, 52.3) |
95% Confidence intervals appear in parenthesis. Bold font indicates GCeq values are significantly different from corresponding current GC contents.