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. Author manuscript; available in PMC: 2011 Apr 1.
Published in final edited form as: Pediatr Res. 2010 Apr;67(4):345–351. doi: 10.1203/PDR.0b013e3181d22a73

Table 1.

Oligonucleotide primers used for detection of different chemokines

Gene Primer Sequences Annealing Temp. (°C)
KC/Cxcl1 Forward: 5′-ACCGAAGTCATAGCCACACTC -3′
Reverse: 5′-TGGGGACACCTTTTAGCATC -3′
52
Mip2/Cxcl2 Forward: 5′-CCCAGACAGAAGTCATAGCCAC -3′
Reverse: 5′-GCCTTGCCTTTGTTCAGTATC -3′
52
TNFα Forward: 5′-AAGGGAGAGTGGTCAGTTGCC -3′
Reverse: 5′-CCTCAGGGAAGAGTCTGGAAAGG -3′
55
Rantes Forward: 5′-GGAGTATTTCTACACCAGCAGC -3′
Reverse: 5′-TCTTGAACCCACTTCTTCTCTG -3′
52
Cxcl9 Forward: 5′-GAGCTAGATAGACCTCACCAAG -3′
Reverse: 5′-CCATTAGCACCATCTCTGA -3′
55
Cxcl10 Forward: 5′-TCGCTCAAGTGGCTGGGATG -3′
Reverse: 5′-TAGGGAGGACAAGGAGGGTGTG -3′
55
Gapdh Forward: 5′-TGGTTTGACAATGAATACGGCTAC -3′
Reverse: 5′-GGTGGGTGGTCCAAGGTTTC -3′
55
Rotavirus VP6 Forward: 5′-GCGGTAGCGGTGTTATTTCC -3′
Reverse: 5′-TTGTTTTGCTTGCGTCGG -3′
55
Rotavirus NSP3 Forward: 5′-TGTCAAGAGAATACCTGGGAAATC -3′
Reverse: 5′-GGAATCATCAACTTCAACTTCACC -3′
54
Ccl12 Forward: 5′-CACCATCAGTCCTCAGGTAT -3′
Reverse: 5′-GGACGTGAATCTTCTGCTTA -3′
54

Temp = temperature