TABLE 5.
Association of SNPs and haplotypes with CAD in GeneBank
| All Subjects (n = 3031) |
Subjects with LDL > 100 mg/dl (n = 1212) |
|||||||
|---|---|---|---|---|---|---|---|---|
| Number of alleles | 0 | 1 | 2 | P | 0 | 1 | 2 | P |
| rs2048327a | 1 | 1.2 (0.9–1.6) | 1.5 (1.0–2.2) | 0.04 | 1 | 1.2 (0.8–1.8) | 1.7 (0.9–3.0) | 0.09 |
| rs3127599a | 1 | 1.2 (0.9–1.6) | 1.1 (0.7–1.6) | 0.32 | 1 | 1.5 (1.0–2.2) | 0.9 (0.5–1.7) | 0.44 |
| rs7767084a | 1 | 1.3 (0.9–1.7) | 0.8 (0.4–1.5) | 0.40 | 1 | 1.2 (0.8–1.9) | 0.8 (0.2–2.8) | 0.50 |
| rs10755578a | 1 | 1.3 (0.9–1.6) | 1.4 (1.0–2.0) | 0.04 | 1 | 1.1 (0.7–1.6) | 1.4 (0.0–2.4) | 0.19 |
| CTTGb | 1 | 1.1 (0.9–1.5) | 2.2 (0.9–5.2) | 0.09 | 1 | 1.2 (0.8–1.8) | 1.2 (0.4–3.4) | 0.46 |
| CCTCb | 1 | 1.3 (0.7–2.7) | *NA | 0.39 | 1 | 1.9 (0.6–5.8) | *NA | 0.23 |
| rs6919346c | 1 | 1.0 (0.8–1.4) | 0.5 (0.2–0.9) | 0.32 | 1 | 0.9 (0.6–1.4) | 0.4 (0.1–1.0) | 0.15 |
| rs9457925d | 1 | 2.2 (0.9–5.2) | *NA | 0.07 | 1 | 2.6 (0.8–9.0) | *NA | 0.12 |
| rs2292334d | 1 | 1.2 (1.0–1.6) | 1.5 (1.0–2.2) | 0.03 | 1 | 1.2 (0.8–1.7) | 1.7 (1.0–3.2) | 0.07 |
Data are shown as OR (95% CI) with adjustment for age and gender.
ORs were not calculated for homozygous carriers of these variants since there were only three subjects carrying two alleles.
Reported by Tregouet et al. (2009).
Risk haplotypes of rs2048327, rs3127599, rs7767084, and rs10755578 reported by Tregouet et al. (2009).
Reported by Ober et al. (2009).
Part of ongoing GWAS currently being carried out at the Cleveland Clinic using the Affymetrix 6.0 GeneChip.