TABLE 2.
Ecological concepts shared between human (or model system)-associated communities and environmental communities
| Concept | Community or environmental factor (references) |
|
|---|---|---|
| Human-associated/mouse model | Environmental/other | |
| Temporal stability | Gut (247, 379) | Aquatic communities (41, 49, 160) |
| Oral communities (214, 260, 269) | Soil (114) | |
| Chickens (168) | ||
| Leeches (164) | ||
| Resistance/resilience—structural | Diet (65, 132, 179, 191, 206) | Soil with antibiotics (64, 173, 355, 378) |
| Antibiotics (15, 68) | Soil with minerals/fertilizers (113, 114, 129) | |
| Aquatic communities in dissolved organic carbon/matter (57, 73, 158) | ||
| Aquatic communities in nutrient runoff (i.e., nitrogen and phosphorus) (95, 127, 347) | ||
| Livestock growth-promoting antibiotics (74, 84, 87, 168) | ||
| Livestock growth-promoting antibiotic alternatives (135, 235) | ||
| Resistance/resilience—functional | Aquatic microcosm (217) | |
| Microbial mat (370) | ||
| Soil (114, 278) | ||
| Methanogenic reactor (90, 91) | ||
| Invasion | Potential pathogens/known pathogens (180, 346) | Aquatic microcosm (217) |
| Probiotics (16, 58, 178, 249, 271, 336, 359, 373) | Insect guts (71, 274) | |
| Biocontrol—alfafa protected against oomycete diseases (123, 305) | ||
| Biocontrol—tomatoes protected against foot and root rot (159) | ||
| Plant growth-promoting bacteria (19, 122) | ||
| Growth-promoting probiotics (231) | ||
| Probiotics for infection prevention (5, 299, 360, 376) | ||