TABLE 1.
Isolate | ST at locusa: |
DSTb | ABC type | Cladec | ||||||
---|---|---|---|---|---|---|---|---|---|---|
AAT1 | ACC1 | ADP1 | MPIb | SYA | VPS13 | ZWF1 | ||||
1 | 54 | 31 | 10 | 36 | 66 | 185 | 111 | 1162 | B | 16 |
2 | 55 | 14 | 4 | 54 | 6 | 6 | 15 | 1171 | A | 8 |
3 | 13 | 13 | 85 | 6 | 50 | 32 | 15 | 1163 | B | 3 |
4 | 20 | 3 | 6 | 2 | 51 | 36 | 5 | 1172 | A | 1 |
5 | 2 | 5 | 5 | 12 | 2 | 6 | 154 | 1164 | A | 1 |
6 | 25 | 7 | 6 | 3 | 34 | 24 | 37 | 1173 | A | 8 |
7 | 70 | 14 | 6 | 4 | 35 | 10 | 8 | 1174 | B | 4 |
8 | 2 | 8 | 2 | 2 | 2 | 6 | 5 | 1175 | A | 1 |
9 | 42 | 5 | 5 | 19 | 2 | 6 | 5 | 1176 | A | 1 |
10 | 2 | 5 | 5 | 2 | 2 | 6 | 154 | 1165 | A | 1 |
11 | 13 | 10 | 15 | 2 | 2 | 37 | 15 | 1177 | B | 3 |
12 | 33 | 14 | 38 | 2 | 78 | 122 | 5 | 1178 | B | 8 |
13 | 2 | 2 | 6 | 2 | 2 | 6 | 5 | 1179 | A | 1 |
14 | 108 | 5 | 5 | 2 | 2 | 6 | 5 | 1166 | A | 1 |
15 | 60 | 3 | 3 | 3 | 3 | 39 | 95 | 1180 | A | 9 |
16 | 47 | 14 | 57 | 28 | 44 | 30 | 136 | 1167 | A | 17 |
17 | 47 | 14 | 57 | 28 | 44 | 30 | 5 | 1181 | A | 17 |
18 | 60 | 3 | 3 | 3 | 3 | 39 | 3 | 1182 | A | 9 |
19 | 2 | 5 | 2 | 4 | 2 | 24 | 5 | 1183 | A | 1 |
20 | 109 | 7 | 10 | 4 | 65 | 110 | 155 | 1168 | A | S |
21 | 2 | 5 | 5 | 27 | 2 | 71 | 5 | 1184 | A | 1 |
22 | 2 | 2 | 5 | 4 | 2 | 6 | 5 | 1185 | A | 1 |
23 | 13 | 7 | 15 | 6 | 77 | 55 | 156 | 1169 | B | 3 |
24 | 35 | 2 | 4 | 4 | 36 | 4 | 4 | 1186 | A | 2 |
25 | 2 | 7 | 6 | 3 | 6 | 27 | 37 | 1187 | A | 8 |
26 | 21 | 17 | 21 | 19 | 27 | 27 | 22 | 1188 | B | 12 |
27 | 31 | 5 | 6 | 2 | 2 | 6 | 5 | 1189 | C | 1 |
28 | 13 | 74 | 15 | 6 | 7 | 37 | 5 | 1176 | A | 3 |
29 | 47 | 14 | 52 | 28 | 44 | 30 | 6 | 1190 | A | 17 |
30 | 8 | 5 | 2 | 2 | 2 | 24 | 5 | 1191 | A | 1 |
31 | 13 | 11 | 15 | 15 | 50 | 37 | 15 | 1192 | A | 3 |
32 | 47 | 3 | 52 | 28 | 44 | 4 | 6 | 1193 | A | 17 |
Numbers refer to assigned alleles (STs) (http://calbicans.mlst.net/). Boldface type indicates new STs from existing SNPs. Italic type indicates a new mutation.
Numbers refer to assigned DSTs.
S, singleton.