TABLE 3.
HAV reference sequences retrieved from GenBank for bioinformatics analysis
| GenBank accession no. | Strain code | Subgenotype | Sequenced length (bp) | Yr, place of isolation, place of infection if different |
|---|---|---|---|---|
| K02990 | LA | IA | 7,478 | 1975, United States |
| X75215 | GBM | IA | 7,431 | 1976, Germany |
| X83302 | FG | IA | 7,421 | 1985, Italy |
| AF357222 | LU38 | IA | 7,477 | 1988, China |
| AF485328 | LY6 | IA | 7,477 | 2002, China |
| AF512536 | DL3 | IA | 7,476 | 2002, China |
| AB020564 | AH1 | IA | 7,477 | 1992, Japan |
| AB020565 | AH2 | IA | 7,477 | 1991, Japan |
| AB020566 | AH3 | IA | 7,445 | 1993, Japan |
| AB020567 | FH1 | IA | 7,477 | 1992, Japan |
| AB020568 | FH2 | IA | 7,478 | 1993, Japan |
| AB020569 | FH3 | IA | 7,477 | 1994, Japan |
| M14707 | HM-175 | IB | 7,478 | 1976, Australia |
| M20273 | MBB | IB | 7,470 | 1978, Germany, North Africa |
| AF268396 | HAF-203 | IB | 7,468 | 1992, Brazil |
| AY644676 | CF53-Berne | IIA | 7,426 | 1979, France |
| AY644670 | SLF88 | IIB | 7,414 | 1988, United States, Sierra Leone |
| AY644337 | HMH IIIA | IIIA | 7,166 | 2003, Germany |
| AB279732 | JNG04-90F | IIIA | 7,478 | 1990, Japan |
| AB279733 | JNG08-92F | IIIA | 7,476 | 1992, Japan, Madagascar |
| AB279734 | J95-8F | IIIA | 7,478 | 1995, Japan, Philippines |
| AB279735 | J85-1F | IIIB | 7,478 | 1985, Japan |
| AB258387 | JNG06-90F | IIIB | 7,462 | 1990, Japan |
| D00924 | AGM27 | V (SHAVa) | 7,400 | 1985, Kenya |
a
SHAV, simian hepatitis A virus.