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. 2010 Jun 25;285(37):28565–28576. doi: 10.1074/jbc.M110.114710

TABLE 1.

List of parameter values deduced from independent experiments and literature sources

Parameters Description Value Units
α1 Degradation rate of Pel proteina 4.94 × 10−2 h−1
α2 Degradation rate of KdgR proteina 3.47 × 10−2 h−1
β2 Maximum rate of synthesis of KdgRb 7.00 × 10−2 μm·h−1
Km Michaelis-Menten constant for Pel·PGA complexa 6.8 mm
Kd3 Equilibrium dissociation constant for KdgR2·KDG2 complexc 0.4 mm
kcat Rate constant of the enzymatic Pel reactions in purified conditionsd 6 × 104 min−1

a The weight-characterized Michaelis-Menten constant KM = 1.2 g/liter has been measured in independent experiments as reported in this paper. From this value, one deduces the molar Michaelis-Menten constant Km = KM/P, where P is the molecular weight of the galacturonate (p = 176 Da) (30). For a theoretical discussion of the relation between KM and Km, see also supplemental material (Section 3).

b Using the estimate that the number of KdgR2 molecules measured during the growth phase is about 700 molecules/bacteria.

c Approximately 0.4 mm of KDG is required for a dissociation of 50% KdgR operator complexes (16). Let us note that the molecular weight of KDG (C6O6H10) is 178 Da, which is close to that of the galacturonate residue (176 Da).

d The kcat of the five major Pel enzymes were measured in purified conditions, as reported in Ref. 30.