Table II. Protein-protein comparison analysis of mouse LC/MS/MS data.
Shown are constituents of HPLC fractions RLC-5, -6, and -7. Proteins detected by two or more distinct peptides are shown. RLC exhibited 95% sequence coverage. Database acc. no., IPI database accession number; AA cov., percent amino acid sequence coverage; dist. pep., distinct peptides.
| RLC-5 |
RLC-6 |
RLC-7 |
Database acc. no. | AA cov. | No. dist. pep. | Distinct summed MS/MS score | Protein name | |||
|---|---|---|---|---|---|---|---|---|---|---|
| No. spectra | Mean intensity | No. spectra | Mean intensity | No. spectra | Mean intensity | |||||
| 40 | 2.11e+06 | 69 | 4.09e+06 | 78 | 5.46e+06 | IPI00555015 | 95 | 24 | 467.94 | Myl2; myosin regulatory light chain 2, ventricular/cardiac muscle |
| 56 | 7.20e+05 | 30 | 3.47e+05 | 29 | 3.99e+05 | IPI00123316 | 71 | 33 | 578.58 | Tpm1; 33-kDa protein |
| 9 | 8.89e+04 | 13 | 2.10e+05 | 7 | 1.35e+05 | IPI00400016 | 7 | 10 | 179.67 | Lamc1; laminin subunit γ-1 precursor |
| 1 | 5.92e+04 | 2 | 1.14e+05 | 0 | 0.00e+00 | IPI00227299 | 8 | 3 | 43.46 | Vim; vimentin |
| 0 | 0.00e+00 | 2 | 4.88e+04 | 3 | 4.52e+04 | IPI00130102 | 7 | 3 | 38.97 | Des; desmin |
| 1 | 2.87e+04 | 2 | 8.35e+04 | 2 | 2.26e+05 | IPI00346834 | 2 | 2 | 31.94 | Similar to c |
| 0 | 0.00e+00 | 0 | 0.00e+00 | 2 | 2.91e+05 | IPI00120900 | 4 | 2 | 19.35 | Ovgp1; oviduct-specific glycoprotein precursor |
| 1 | 3.29e+05 | 0 | 0.00e+00 | 1 | 9.70e+05 | IPI00120455 | 4 | 2 | 18.53 | Snx13; sorting nexin-13 |