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. 2010 Jul 6;154(1):273–286. doi: 10.1104/pp.109.150540

Table I. Relative expression levels of confirmed OCL1 target genes in OCL1-OE and OCL1-RNAi plants.

Oligo IDa and/or Gene Name Trend in OCL1-OE (Plantlet) Ratio OCL1-OE/Wild Typeb
 Ratio OCL1-RNAi/Wild Typec Annotationf Maize Gene Modelg Class
18-DAS Plantlet Shoot Apexd Immature Eard 18-DAS Plantlete
OCL1 Up 23.80 4.00* 3.46* 0.51* Transcription factor HD-ZIP IV family GRMZM2G026643 Transcription factor
MZ00005958 Down 0.18 1.50 0.00* 1.38* Maize indole-3-glycerol phosphate lyase (Igl) GRMZM2G015892 Defense
MZ00014373 Down 0.10 0.39* 0.04* 1.05 MtN3/SALIVA-related transmembrane protein GRMZM2G179349 Envelope
MZ00018561 Down 0.38 0.57* 1.87 0.99 Pro-rich protein; structural constituent of cell wall GRMZM2G345700 Envelope
MZ00022171 Up 20.88 0.43 0.43 1.04 Male sterility MS5 family protein;
contains TPR domain GRMZM2G075563 Other
MZ00024305 LtpII.12 Up 4.34 1.94* 2.40* 0.58* Nonspecific lipid transfer protein (nsLTP) type 2 GRMZM2G387360 Lipid
MZ00024414 Down 0.09 0.65* 1.52 1.23* MATE efflux family protein GRMZM2G339488 Envelope
MZ00028617 Down 0.04 0.61* 1.61 1.30* Cytochrome P450; oxygen binding;
CYP78A6-like GRMZM2G034471 Other
MZ00029574 Up 7.35 1.25* nd 0.80* Carboxylesterase; ATCXE18-like GRMZM2G104141 Lipid
MZ00030315 Up 13.51 1.55* 0.18 0.55* Integral membrane family protein; contains DUF588 GRMZM2G132128 Envelope
MZ00031783 ZmWBC11a Up 6.94 1.05 1.27* 0.73* ABC transporter; ABCG11/COF1/DSO/WBC11-like GRMZM2G308860 Lipid
MZ00031955 Up 7.08 2.57* 2.17* 1.09 SEC14/phosphoglyceride transfer family protein GRMZM2G088501 Lipid
ZmFAR1 Up 2.78 nd nd 1.21 Fatty acyl-CoA reductase (alcohol-forming)/oxidoreductase; FAR1-like GRMZM2G036217 Lipid
ZmWBC11b Up 2.69 nd nd 1.00 ABC transporter; ABCG11/COF1/DSO/WBC11-like GRMZM2G096952 Lipid
ZmWBC11c Up 2.06 nd nd 0.49* ABC transporter; ABCG11/COF1/DSO/WBC11-like GRMZM2G143668 Lipid
a

Identification number of the corresponding oligonucleotide deposited on the microarray.

b

Mean of a biological triplicate and a technical replicate; the expression values are reported relative to one of the wild-type samples.

c

Mean of a technical triplicate; the expression values are reported relative to the wild-type samples.

d

Asterisks indicate a trend of differential expression similar to the one observed in OCL1-OE plantlets. nd, Not determined.

e

Asterisks indicate a trend of differential expression opposite to the one observed in OCL1-OE plantlets.

f

Manually improved annotations from SwissProt, GenBank, Trembl, and InterPro databases.

g

Maize genome release 4a.53 of March 8, 2010 (http://www.maizesequence.org).