Table 3.
| CAGE GO | SAGE GO | Microarray GO |
|---|---|---|
| (1) Regulation of striated muscle contraction | (1) Regulation of muscle contraction | (1) Cyclin-dependent protein kinase inhibitor activity |
| (2) Cardiac muscle contraction | (2) Cardiac muscle contraction | (2) Myogenesis |
| (3) Myogenesis | (3) Myogenesis | (3) Skeletal muscle development |
| (4) Regulation of muscle contraction | (4) Regulation of striated muscle contraction | (4) Myoblast differentiation |
| (5) Skeletal muscle development | (5) Skeletal muscle development | (5) 6-Phosphofructokinase activity |
| (6) Muscle Development | (6) Myofibril assembly | (6) Muscle Development |
| (7) Striated muscle contraction | (7) Muscle Development | (7) Muscle cell differentiation |
| (8) Myoblast differentiation | (8) Myoblast fusion | (8) Tumor suppressor activity |
| (9) Muscle cell differentiation | (9) Striated muscle contraction | (9) Myofibril assembly |
| (10) Sarcomere organization | (10) Muscle cell differentiation | (10) Heart development |
The top 10 GO biological processes associated with the top 30 genes for CAGE, SAGE and microarray experiments indicate clear muscle relations, with the exception of three (in italics) processes in the microarray data.