Table 6.
Thresholds for r 2 indicating significant LD arranged per chromosome, group and quantile according to the total distribution of r 2 for pair-wise marker combinations
| Group | Number of cultivars within group | Number of markers per chromosome | 136 | 55 | 36 | 80 | 62 | 84 | 46 | 26 | 44 | 46 | 52 | 53 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Quantile | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | ||
| Ancient | 27 | 0.999 | 0.83 | 0.70 | 0.82 | 0.87 | 0.84 | 0.71 | 0.86 | 0.52 | 0.71 | 0.69 | 0.85 | 0.78 |
| 0.990 | 0.58 | 0.41 | 0.54 | 0.71 | 0.70 | 0.41 | 0.72 | 0.39 | 0.62 | 0.52 | 0.68 | 0.53 | ||
| 0.950 | 0.27 | 0.21 | 0.31 | 0.40 | 0.40 | 0.23 | 0.34 | 0.22 | 0.32 | 0.24 | 0.32 | 0.31 | ||
| Fresh consumption | 102 | 0.999 | 0.48 | 0.54 | 0.51 | 0.71 | 0.84 | 0.60 | 0.76 | 0.28 | 0.72 | 0.77 | 0.62 | 0.58 |
| 0.990 | 0.17 | 0.22 | 0.26 | 0.55 | 0.67 | 0.15 | 0.51 | 0.22 | 0.29 | 0.54 | 0.36 | 0.41 | ||
| 0.950 | 0.07 | 0.08 | 0.08 | 0.18 | 0.36 | 0.07 | 0.17 | 0.10 | 0.10 | 0.26 | 0.09 | 0.13 | ||
| Processing | 56 | 0.999 | 0.41 | 0.51 | 0.72 | 0.76 | 0.78 | 0.69 | 0.80 | 0.23 | 0.82 | 0.76 | 0.77 | 0.68 |
| 0.990 | 0.21 | 0.21 | 0.22 | 0.62 | 0.65 | 0.19 | 0.47 | 0.17 | 0.50 | 0.52 | 0.57 | 0.50 | ||
| 0.950 | 0.10 | 0.11 | 0.11 | 0.23 | 0.37 | 0.10 | 0.14 | 0.08 | 0.16 | 0.26 | 0.15 | 0.21 | ||
| Starch | 44 | 0.999 | 0.77 | 0.55 | 0.40 | 0.72 | 0.83 | 0.51 | 0.67 | 0.69 | 0.74 | 0.43 | 0.83 | 0.79 |
| 0.990 | 0.43 | 0.29 | 0.26 | 0.52 | 0.62 | 0.24 | 0.41 | 0.20 | 0.52 | 0.29 | 0.49 | 0.54 | ||
| 0.950 | 0.16 | 0.15 | 0.13 | 0.20 | 0.30 | 0.13 | 0.19 | 0.12 | 0.18 | 0.15 | 0.16 | 0.22 |