Table 1.
Ribonuclease |
Tma (°C) |
kcat/KMb (106 M−1s−1) |
Kd′c (nM) |
IC50d (μM) |
IC50e (μM) |
Z |
---|---|---|---|---|---|---|
RNase A | 64 | 6.4 ± 0.3 | 4.4 × 10−5 f | >25 | >25 | +4 |
G88R RNase A | 63 | 8.2 ± 0.2 | 1.8 ± 0.3 | 3.3 ± 0.1 | 3.4 | +5 |
G88C RNase A–NEM | 64 | 6.8 ± 0.1 | 1.4 ± 0.4 | 28 ± 2 | 28 | +4 |
(G88C RNase A)2–1 | ND | 12 ± 1 | 8.2 ± 0.2 | 22 ± 3 | 44 | +8 |
(G88C RNase A)2–2 | ND | 11 ± 1 | 2.6 ± 0.2 | 25 ± 1 | 50 | +8 |
(G88C RNase A)2–3 | 64 | 6.6 ± 0.6 | 9.6 ± 0.4 | 11 ± 1 | 21 | +8 |
(G88C RNase A)2–4 | ND | 7.4 ± 0.5 | 18 ± 2 | 10 ± 1 | 20 | +8 |
(G88C RNase A)2–5 | ND | 8.6 ± 0.1 | 8.6 ± 1.6 | 14 ± 1 | 27 | +8 |
(G88C RNase A)2–6 | ND | 5.5 ± 0.03 | 14 ± 3 | 27 ± 2 | 55 | +8 |
(G88C RNase A)3–7 | ND | 12 ± 1 | 39 ± 3 | 16 ± 1 | 48 | +12 |
(G88C RNase A)3–8 | 64 | 16 ± 0.4 | 17 ± 1 | 8.6 ± 0.5 | 27 | +13 |
(A19C RNase A)3–8 | ND | 7.5 ± 0.4 | <1.4 | >25 | >25 | +13 |
(D38R/R39D/N67R/G88C RNase A)3–8 | ND | 8.4 ± 0.3 | ND | 1.0 ± 0.1 | 3.3 | +16 |
| ||||||
(C31A/C32A/G88C BS-RNase)3–8 | ND | 5.8 ± 0.3 | 84 ± 12 | 0.78 ± 0.05 | 2.1 | +28 |
| ||||||
RNase 1 | 58 | 29 ± 1 | 2.9 × 10−7 g | >25 | >25 | +6 |
(G89C RNase 1)3–8 | ND | 16 ± 3 | <1.4 | 1.5 ± 0.1 | 4.6 | +19 |
| ||||||
ONC | 90 h | 0.0018 ± 0.00005 | >150 i | 0.22 ± 0.01 | 0.22 | +5 |
(S72C ONC)3–8 | ND | 0.012 ± 0.0005 | ND | 0.79 ± 0.05 | 2.8 | +16 |
ND, not determined.
Values Tm (± 2 °C) in 1×DPBS and determined by UV spectroscopy.
Per active-site values of kcat/KM (± SE) for catalysis of 6-FAM–dArU(dA)2–6-TAMRA cleavage in 1×DPBS containing BSA (0.1 mg/mL) at (20 ± 2) °C. 6-FAM–dArUdGdA–6-TAMRA was the substrate for ONC and (S72C ONC)3–8.
Per active-site values of Kd′ (± SE) for the complex with RI at (20 ± 2) °C.
Per molecule values of IC50 (± SE) for incorporation of [methyl-3H]thymidine into the DNA of K-562 cells exposed to a ribonuclease and calculated with eq 3.
Per active-site values of IC50 calculated by multiplying the IC50 value by the number of monomers in the conjugate.
From ref (64).
From ref (45).
From ref (37) and determined by circular dichroism spectroscopy.
Value of Ki from ref (12).