TABLE 2.
Genes exhibiting an additive mode of transcription regulation in one hybrid cross and a nonadditive mode in one or two of the other hybrid crosses
| Gene names | No. clones | DR | LD | RL | Functional categories |
|---|---|---|---|---|---|
| Peroxiredoxin-5, mitochondrial precursor | 1 | A | N-A | * | Antioxydation |
| Tubulin α-1A chain | 1 | * | A | N-A* | C.M./I.P.T./chromosome segregation |
| Tubulin α-1C chain | 1 | A | A | N-A* | C.M./I.P.T./chromosome segregation |
| UV excision repair protein RAD23 homolog B | 1 | * | N-A | A | DNA repair |
| Heat shock protein HSP 90-β | 1 | A | N-A | * | Immunity and defense |
| Peroxisomal multifunctional enzyme type 2 | 1 | A | N-A | * | L.F.A metabolism |
| H-2 class II histocompatibility antigen γ chain | 2 | N-A | A | A | MHCII-mediated immunity |
| H-2 class II histocompatibility antigen γ chain | 1 | A | N-A | * | MHCII-mediated immunity |
| NADH dehydrogenase [ubiquinone] 1 α subcomplex subunit 8 | 1 | A | N-A | * | Oxydative phosphorilation |
| Heterogeneous nuclear ribonucleoprotein A/B | 1 | * | A | N-A | Pre-mRNA processing |
| Heterogeneous nuclear ribonucleoprotein A0 | 1 | A | N-A | * | Pre-mRNA processing |
| 26S proteasome non-ATPase regulatory subunit 14 | 1 | * | A | N-A | Protein metabolism and modification |
| 40S ribosomal protein S2 | 1 | A | N-A | * | Protein metabolism and modification |
| Elongation factor 1-δ | 1 | A | N-A | N-A* | Protein metabolism and modification |
| Nucleoside diphosphate kinase A | 5 | A | * | N-A | Pyrimidin metabolism |
| Nucleoside diphosphate kinase B | 4 | A | * | N-A | Pyrimidin metabolism |
| Cold-inducible RNA-binding protein | 2 | A | N-A | * | RNA binding |
| CD63 antigen | 1 | A | * | N-A | Signal transduction |
| Acyl-CoA-binding protein | 1 | A | * | N-A | Intracellular transport |
| ADP/ATP translocase 2 | 2 | A | N-A | * | Intracellular transport |
| ADP/ATP translocase 2 | 1 | A | N-A | N-A* | Intracellular transport |
| Myelin expression factor 2 | 1 | A | * | N-A | Intracellular transport |
| Oncorhynchus mykiss invariant chain S25-7 mRNA | 1 | N-A | A | * | Intracellular transport |
| Vacuolar ATP synthase 16-kDa proteolipid subunit | 2 | A | N-A | * | Intracellular transport |
| Apolipoprotein B-100 precursor | 2 | N-A | A | N-A* | Intracellular transport/L.F.A. metabolism |
Only genes for which gene ontology annotation could be found are presented here. Genes without gene ontology annotation can be found in Table S5.
No. clones, number of clones; DR, Domestic × Rupert hybrids; LD, Laval × Domestic hybrids; RL, Rupert × Laval hybrids; N-A, nonadditive mode; A, additive mode; *, transcripts did not show significant difference between their parental strains. Abbreviation for the functional categories: C.M., cell motility, I.P.T., intracellular protein traffic, L.F.A., Lipid and fatty acid. The functional category is defined for unique gene in Panther online classification system (http://www.pantherdb.org).