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. 2010 Jun 23;24(8):1512–1528. doi: 10.1210/me.2009-0320

Table 1.

Sense oligonucleotides used in gel shift assays to determine E-box binding in IL-8 and MiTF-CX promoters

Promoter Sense oligonucleotides
IL-8
 E-box 1 −204TGGGCCATCAGTTGCAAATCGTGGAA−179
 E-box 2 −361AGCATACAATTGATAATTCACCAAATTGTGGAG−329
 E-box 3/4 −432TGTTCTAACACCTGCCACTCTAGTACTATATCTGTCACATGGTCTATGA−384
 E-box 5 −506TCACCATCATGATAGCATCTGTAATTAAC−478
 E-box 6 −677TGTGAAGACATGTGCCCCTTCACTCT−652
 E-box 7 −842TGTCTTAGTACCACTTGTCTATTCTGCT−815
 E-box 8 −898TGCCTTGCTCCAACTGCCTTTGGAAGA−872
 E-box 9 −1104TGGAACCCAGATGCTCTTTCCACTAAGC−1077
 E-box 10 −1483TGGAAAGCATTTGAAAATGGCATTCCC−1457
MiTF-CX
 E-box 1 −249TTCCCTCTCCAACTGCTTTGTTTCAGG−223
 E-box 2/3 −332AGAACAGATCACATGTGCTTACTGTCAGG−304
 E-box 4 −374ATCTGCTCCAGTTGTGCAAGAAGTGG−349
 E-box 5 −534AGAGGGAACACTTGATTAAAGTGGG−510
 E-box 6 −591 TGCCTCAACCTGCAGATGTTCAAATCG−565
 E-box 7 −882CCACTTAACCAGTACATCTGTGTTCAAG−855
 E-box 8 −951AGAGGCTGCATGCATGTGGACAGGT−927
 E-box 9 −988TGGTCTCCAGGCACCTGATGATACC−964
 E-box 10 −1117ACAATAGTCAAATGTGTTTCTCTACAC−1091
 E-box 11 −1215TGGGCATCAGCAGTTGGGGGCATT−1192

E-box sequences are bold. Two overlapping E-boxes are indicated in bold and underlined