Table 3.
Chr: region (Mb hg18) | Max |XP-EHH| | Pop selected | Genes (number) |
1: 160.36–160.54 | 4.53 | EA | NOSIAP (1) |
2: 134.63–137.29 | 13.36 | EA | CCNT2, RAB3GAP1, LCT (13) |
2: 237.19–237.34 | 4.62 | EA | None (0) |
3: 10.59–10.86 | 5.07 | EA | SLC6A11, LOC285370 (2) |
3: 11.59–11.71 | 5.07 | EA | VGLL4 (1) |
4: 30.66–31.01 | 4.86 | EA | PCDH7 (1) |
5: 56.95–57.29 | 4.65 | AJ | None (0) |
5: 112.64–113.18 | 4.73 | AJ | MCC, YTHDC2 (2) |
6: 31.35–32.47 | 5.95 | AJ | TNF, CYP21A2, SLC44A4 (60) |
6: 156.46–156.76 | 4.77 | AJ | None (0) |
8: 49.2–49.31 | 5.04 | EA | None (0) |
8: 52.12–52.36 | 4.74 | EA | None (0) |
8: 55.54–55.97 | 4.55 | AJ | RP1 (1) |
8: 80.25–80.73 | 4.69 | EA | STMN2 (1) |
11: 12.84–12.93 | 4.78 | AJ | TEAD1 (1) |
11: 79.65–79.79 | 5.05 | AJ | None (0) |
12: 109.84–111.85 | 5.95 | AJ | ATXN2, ALDH2, TRAFD1 (18) |
13: 98.06–98.21 | 4.54 | EA | SLC15A1 (1) |
15: 46.73–47.17 | 5.18 | AJ | SHC4, EID1, SECISBP2L (4) |
18: 73.91–74.11 | 4.48 | AJ | None (0) |
The XP-EHH test directly compared the AJ and EA populations for regions that show stronger selection in one population relative to the other. The top 10 selected regions for each population are reported. A subset of genes in each interval is listed, with the total number in that region in parentheses.