The 14 STRs used in this study.
| Locus | Rhesus chromosome location** | Repeat motif | Multiplex Group | Dye Label-Forward Primer (5’-3’)**** | Reverse Primer (5’-3’)**** | μM in PCR***** |
|---|---|---|---|---|---|---|
| D3S1768 | 2 | Tetranucleotide | A | FAM-GGTTGCTGCCAAAGATTAGA | CACTGTGATTTGCTGTTGGA | 0.07 |
| D6S276 | 4 | Dinucleotide | B | NED-TTCCAGTGTATACATCAATCAAATCA | GGGTGCAACTTGTTCCTCCT | 0.12 |
| D6S291 | 4 | Dinucleotide | B | VIC-CTCAGAGGATGCCATGTCTAAAATA | GGGGATGACGAATTATTCACTAACT | 0.10 |
| D6S1691 | 4 | Dinucleotide | B | FAM-AGGACAGAATTTTGCCTC | GCTGCTCCTGTATAAGTAATAAAC | 0.10 |
| D7S513 | 3 | Dinucleotide | A | VIC-AGTGTTTTGAAGGTTGTAGGTTAAT | ATATCTTTCAGGGGAGCAGG | 0.07 |
| D7S794 | 3 | Tetranucleotide | A | FAM-ACCATACTCCTCAGCCTCCA | GTGTTCGGGTTCTCCAAAGA | 0.07 |
| D8S1106 | 8 | Tetranucleotide | B | PET-GCGGCATGTTTTCCTACTTT | TTCTCAGAATTGCTCATAGTGC | 0.06 |
| D10S1412 | 9 | Trinucleotide | B | VIC-TGCCTTAGCTCCTGCATACTGA | GGGACAGTTCTTCTCCCTCCA | 0.10 |
| D11S925 | 14 | Dinucleotide | A | VIC-GCTCCTCCAGTAATTCTGTC | TTAGACCATTATGGGGGCAA | 0.09 |
| D13S765 | 17 | Tetranucleotide | A | NED-TGTAACTTACTTCAAATGGCTCA | TTGAAACTTACAGACAGCTTGC | 0.10 |
| D16S403 | 20 | Dinucleotide | A | VIC-GTTTTCTCCCTGGGACATTT | TATTCATTTGTGTGGGCATG | 0.17 |
| D18S72 | 2 | Dinucleotide | B | NED-GCTAGATGACCCAGTTCCC | CTGCAGAAAGGTTACATATTCCA | 0.05 |
| MFGT21* | 8 | Dinucleotide | B | FAM-AACTTCAGTAAGATAAGGACC | CCTGAGGTCTGGACTTTAT | 0.10 |
| MFGT22* | Unknown | Dinucleotide | B | VIC-CAACATAGAGAGATTCCATCTC | CGTTAAGTATGATGTTAGCTAG | 0.15 |
STR and primers developed from Macaca fuscata sequence [Domingo-Roura et al. 1997].
Chromosome locations are based on the NCBI Map Viewer (http://www.ncbi.nlm.nih.gov/mapview/) and the Southwest Foundation Rhesus Genome Map (www.snprc.org/linkage/index.html).
Based on cloned and whole genome sequences
Primer sequences shown in bold font were redesigned from Jan. 2006 rheMac2 draft assembly v.1.0 available on the UCSC Genome Browser (http://www.genome.ucsc.edu). Primers for STRs with name prefix starting with “D” are based on human sequences that are fully, or nearly so, conserved in rhesus.
Primer concentration used for detection with ABI 3730 capillary electrophoresis instrument.