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. Author manuscript; available in PMC: 2011 Jun 1.
Published in final edited form as: Am J Primatol. 2010 Jun;72(7):587–599. doi: 10.1002/ajp.20811

The 14 STRs used in this study.

Locus Rhesus chromosome location** Repeat motif Multiplex Group Dye Label-Forward Primer (5’-3’)**** Reverse Primer (5’-3’)**** μM in PCR*****
D3S1768 2 Tetranucleotide A FAM-GGTTGCTGCCAAAGATTAGA CACTGTGATTTGCTGTTGGA 0.07
D6S276 4 Dinucleotide B NED-TTCCAGTGTATACATCAATCAAATCA GGGTGCAACTTGTTCCTCCT 0.12
D6S291 4 Dinucleotide B VIC-CTCAGAGGATGCCATGTCTAAAATA GGGGATGACGAATTATTCACTAACT 0.10
D6S1691 4 Dinucleotide B FAM-AGGACAGAATTTTGCCTC GCTGCTCCTGTATAAGTAATAAAC 0.10
D7S513 3 Dinucleotide A VIC-AGTGTTTTGAAGGTTGTAGGTTAAT ATATCTTTCAGGGGAGCAGG 0.07
D7S794 3 Tetranucleotide A FAM-ACCATACTCCTCAGCCTCCA GTGTTCGGGTTCTCCAAAGA 0.07
D8S1106 8 Tetranucleotide B PET-GCGGCATGTTTTCCTACTTT TTCTCAGAATTGCTCATAGTGC 0.06
D10S1412 9 Trinucleotide B VIC-TGCCTTAGCTCCTGCATACTGA GGGACAGTTCTTCTCCCTCCA 0.10
D11S925 14 Dinucleotide A VIC-GCTCCTCCAGTAATTCTGTC TTAGACCATTATGGGGGCAA 0.09
D13S765 17 Tetranucleotide A NED-TGTAACTTACTTCAAATGGCTCA TTGAAACTTACAGACAGCTTGC 0.10
D16S403 20 Dinucleotide A VIC-GTTTTCTCCCTGGGACATTT TATTCATTTGTGTGGGCATG 0.17
D18S72 2 Dinucleotide B NED-GCTAGATGACCCAGTTCCC CTGCAGAAAGGTTACATATTCCA 0.05
MFGT21* 8 Dinucleotide B FAM-AACTTCAGTAAGATAAGGACC CCTGAGGTCTGGACTTTAT 0.10
MFGT22* Unknown Dinucleotide B VIC-CAACATAGAGAGATTCCATCTC CGTTAAGTATGATGTTAGCTAG 0.15
*

STR and primers developed from Macaca fuscata sequence [Domingo-Roura et al. 1997].

**

Chromosome locations are based on the NCBI Map Viewer (http://www.ncbi.nlm.nih.gov/mapview/) and the Southwest Foundation Rhesus Genome Map (www.snprc.org/linkage/index.html).

***

Based on cloned and whole genome sequences

***

Primer sequences shown in bold font were redesigned from Jan. 2006 rheMac2 draft assembly v.1.0 available on the UCSC Genome Browser (http://www.genome.ucsc.edu). Primers for STRs with name prefix starting with “D” are based on human sequences that are fully, or nearly so, conserved in rhesus.

*****

Primer concentration used for detection with ABI 3730 capillary electrophoresis instrument.