TABLE 2.
Structural features of the homozygous steric zipper interfaces at position 129
GYMLGS (Met129) | GYVLGS (Val129) | |
---|---|---|
Origin of PrP sequence | Human 127-132 | Human 127-132 |
Amino acid sequence | GYMLGS | GYVLGS |
Surface complementarity (Sc) | 0.74 | 0.75 |
Surface area buried in interface (Å2) | 135 ± 1 | 119 ± 4 |
Sheet-to-sheet distance (Å) | 9.61 ± 1.24 | 9.04 ± 2.51a |
Class of steric zipper | Class 8 (antiparallel) | Class 8 (antiparallel) |
a The large S.D. is reflective of the chevron shape of the steric zipper interface, where one end is tightly packed and close together while the other is spread farther apart. The value here is an average of the distance.