Table 3.
Functions predicted for proteins encoded in the transcriptome of Oesophagostomum dentatum (combined assembly), based on gene ontology (GO)
| GO description (GO code) | Number of predicted peptides (%) |
|---|---|
| Biological process (19 346)a | |
| Metabolic process (GO:0008152) | 2102 (10.9) |
| Proteolysis (GO:0006508) | 1361 (7) |
| Translation (GO:0006412) | 1033 (5.4) |
| Transport (GO:0006810) | 816 (4.2) |
| Protein amino acid phosphorylation (GO:0006468) | 763 (4) |
| Cellular component (11 007) | |
| Intracellular (GO:0005622) | 1925 (17.5) |
| Membrane (GO:0016020) | 1717 (15.6) |
| Nucleus (GO:0005634) | 1279 (11.6) |
| Integral to membrane (GO:0016021) | 1159 (10.5) |
| Ribosome (GO:0005840) | 736 (6.7) |
| Molecular function (35 182) | |
| ATP binding (GO:0005524) | 2645 (7.5) |
| Catalytic activity (GO:0003824) | 2449 (7) |
| Binding (GO:0005488) | 1622 (4.6) |
| Zinc ion binding (GO:0008270) | 1229 (3.5) |
| Oxidoreductase activity (GO:0016491) | 1226 (3.5) |
| Protein binding (GO:0005515) | 1206 (3.4) |
| Nucleic acid binding (GO:0003676) | 919 (2.6) |
| DNA binding (GO:0003677) | 788 (2.2) |
| Structural constituent of ribosome (GO:0003735) | 755 (2.1) |
| Nucleotide binding (GO:0000166) | 717 (2) |
aTotal number of unique GO terms assigned to predicted peptides.
The parental (=level 2) GO categories were assigned according to (InterPro) domains inferred from proteins with homology to functionally annotated molecules.