Table 2.
ΔAUC relative to SA Tableau Search for 200 queries in the ASTRAL 95% data set.
| Method(s) | ΔAUC |
|---|---|
| SA Tableau Search 4096, SHEBA, SA Tableau Search 8192 | 0.000 |
| SA Tableau Search 2048 | 0.0007 |
| SA Tableau Search 1024 | 0.0012 |
| SA Tableau Seach 512 | 0.0023 |
| SA Tableau Search 256 | 0.0039 |
| SA Tableau Search 128 | 0.0090 |
| QP Tableau Search | 0.0160 |
| LOCK2 | 0.0183 |
| TableauSearch | 0.0723 |
| VAST | 0.0746 |
| TOPS | 0.0756 |
| IR Tableau | 0.0761 |
| YAKUSA | 0.1034 |
Difference in AUC relative to SA Tableau Search (4096 restarts) for different methods on the 200 query set against the ASTRAL SCOP 95% sequence identity non-redundant database. The table is sorted by ΔAUC, so that methods with lower AUC than SA Tableau Search (ΔAUC > 0, with p-value < 0.05) are at the bottom of the table. Methods for which there is no statistically significant difference in AUC from SA Tableau Search (4096 restarts) at p-value 0.05 are shown in a single row with ΔAUC = 0.000.