Table 1.
Molecule | Diffusion coefficient (D; μm2 s−11) | Average concentration (u; mM)NB | Sink | Observed turnover number (q; s−11) | Amplitude | Maximum supply capacity (s−11) | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
ATP | 500 (de Graaf et al., 2000) | 5 | Na+/K+ ATPase | 48 (Lupfert et al., 2001) | 0.9999 | 9.0 × 106 | ||||||
Glucose | 500 (Vega et al., 2003) | 1 | GLUT1 | 187 (Barros et al., 2007) | 0.9999 | 1.8 × 106 | ||||||
Pyruvate | 120 (Pfeuffer et al., 2000) | 0.1 | LDH | 269* | 0.9941 | 4.5 × 104 | ||||||
Lactate | 120 (Pfeuffer et al., 2000) | 1.25 | LDH | 269* | 0.9995 | 5.6 × 105 | ||||||
120 (Pfeuffer et al., 2000) | 1.25 | MCT | 85 (Ovens et al., 2010) | 0.9998 | 5.6 × 105 | |||||||
Na+ | 1160 (Goodman et al., 2005) | 10 | Na+/K+ ATPase | 144 (Lupfert et al., 2001) | 0.9999 | 4.3 × 107 | ||||||
Ca2+ | 13 (Allbritton et al., 1992) | 10−4 | NCX | 5000 (Shigekawa and Iwamoto, 2001) | <0 | 4.9 | ||||||
13 (Allbritton et al., 1992) | 10−4 | PMCA | 149* | <0 | 4.9 | |||||||
H+ | 37.8 (Vaughan-Jones et al., 2002) | 4 × 10−5 | NHE | 2000 (Dixon et al., 1987) | <0 | 5.7 | ||||||
37.8 (Vaughan-Jones et al., 2002) | 4 × 10−5 | MCT | 85 (Ovens et al., 2010) | <0 | 5.7 | |||||||
37.8 (Vaughan-Jones et al., 2002) | 4 × 10−5 | PMCA | 298* | <0 | 5.7 | |||||||
37.8 (Vaughan-Jones et al., 2002) | 4 × 10−6 | cytochrome oxidase | 500* | <0 | 0.5 |
Domains were estimated assuming a sink radius a of 0.5 nm and a cell radius b of 10 μm, with the source located at the cell surface. NB, for simplicity concentration (u) is given in millimolar but note that unit consistency requires u to be entered in the equations as molecules/μm3 (and distances in micrometers). Na+/K+ ATPase (EC 3.6.3.9); GLUT1, glucose transporter isoform 1; LDH, lactate dehydrogenase (EC 1.1.1.27); MCT, proton-coupled monocarboxylate transporter; NCX, Na+/Ca2+ exchanger; PMCA, plasma membrane Ca2+ ATPase (EC 3.6.3.8); cytochrome oxidase (EC 1.9.3.1). Maximum supply capacities were estimated with Eq. 8, case II, by setting sink concentration equal to 0.
*BRENDA database, University of Cologne, Germany. The highest turnover numbers for mammalian enzymes are given.