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. 2010 Sep 23;6(9):e1000937. doi: 10.1371/journal.pcbi.1000937

Table 3. Replication of the results of BBB.

Set Approach Validation method Accuracy MCC
BBB SVM LMO25 81.3% 0.630
BBBInline graphic SVM LMO25 73.8% 0.484
BBBInline graphic Chym LMO25 89.6% 0.800
BBB SVM 10-fold 81.2% 0.625
BBBInline graphic SVM 10-fold 74.1% 0.492
BBBInline graphic Chym 10-fold 90.0% 0.810

For the LMO25 method, the accuracy values are the mean of 30 experiments, as explained in the previous section. The Chym results were obtained for FP3 fingerprint format, simGIC semantic method using the entire ontology, and Inline graphic.