Table 7. P-values of 20 pairs of interacting SNPs calculated by the statistic TIH, PLINK, and logistic regression coded by genotypes.
| P-Value | |||||||||||||
| Dataset1 | Dataset2 | ||||||||||||
| TIH | PLINK | Logistic Regression | TIH | PLINK | Logistic Regression | ||||||||
| rs1 | Gene 1 | rs2 | Gene 2 | Recessive | Additive | Dominant | Recessive | Additive | Dominant | ||||
| 626072 | LAMA1 | 6121989 | LAMA5 | 1.11E-15 | 1.63E-07 | 2.61E-02 | 7.82E-08 | 3.14E-06 | 5.67E-07 | 0.001854 | 3.65E-02 | 1.40E-03 | 1.10E-01 |
| 626072 | LAMA1 | 4925386 | LAMA5 | 1.47E-13 | 1.01E-06 | 7.64E-02 | 5.82E-07 | 1.05E-05 | 9.81E-07 | 0.002709 | 5.07E-02 | 1.88E-03 | 1.27E-01 |
| 1052248 | LST1/NCR3 | 3131636 | MICB | 5.56E-13 | 2.86E-09 | 8.61E-03 | 1.14E-09 | 1.11E-05 | 7.76E-10 | 1.76E-05 | 4.47E-01 | 9.67E-06 | 9.75E-06 |
| 1052248 | LST1/NCR3 | 3132468 | MICB | 8.41E-13 | 4.28E-09 | 1.16E-02 | 1.72E-09 | 1.10E-05 | 8.96E-10 | 2.03E-05 | 4.75E-01 | 9.97E-06 | 7.73E-06 |
| 443198 | NOTCH4 | 3131636 | MICB | 1.13E-11 | 6.14E-08 | 3.29E-01 | 2.95E-08 | 4.53E-05 | 3.98E-08 | 6.33E-05 | 2.93E-02 | 3.63E-05 | 7.83E-04 |
| 443198 | NOTCH4 | 3132468 | MICB | 1.19E-10 | 2.81E-07 | 3.21E-01 | 1.52E-07 | 1.57E-04 | 6.55E-08 | 6.32E-05 | 2.81E-02 | 4.65E-05 | 1.39E-03 |
| 1799964 | LTA/TNF | 3131636 | MICB | 1.62E-10 | 3.08E-07 | 7.09E-02 | 1.52E-07 | 3.68E-02 | 1.36E-09 | 7.26E-05 | 4.19E-01 | 3.25E-05 | 2.59E-06 |
| 1799964 | LTA/TNF | 3132468 | MICB | 2.94E-10 | 7.26E-07 | 9.57E-02 | 3.80E-07 | 3.80E-02 | 2.51E-09 | 8.30E-05 | 4.51E-01 | 4.33E-05 | 2.76E-06 |
| 4766587 | ACACB | 4807055 | NDUFA11 | 3.07E-10 | 6.25E-05 | 3.13E-04 | 4.84E-05 | 4.51E-01 | 6.61E-07 | 0.000855 | 3.27E-03 | 7.74E-04 | 9.85E-01 |
| 2227956 | HSPA1L | 3135392 | HLA-DRA | 3.20E-10 | 2.46E-06 | 1.14E-04 | 1.49E-06 | 2.63E-02 | 7.82E-10 | 9.60E-06 | 7.29E-05 | 5.17E-06 | 2.14E-01 |
| 1060856 | ALDH7A1 | 2711288 | PRKCE | 3.57E-10 | 3.01E-05 | 1.93E-07 | 1.71E-05 | 8.81E-01 | 2.56E-07 | 0.000292 | 7.50E-01 | 2.09E-04 | 2.26E-04 |
| 2012359 | PARP4 | 10823333 | HK1 | 5.65E-10 | 3.84E-05 | 1.26E-04 | 2.70E-05 | 1.37E-01 | 7.20E-07 | 0.000148 | 2.06E-04 | 7.68E-05 | 1.00E+00 |
| 9311951 | MAGI1 | 11195879 | NRG3 | 8.53E-10 | 6.22E-05 | 1.00E-03 | 3.29E-05 | 3.40E-03 | 8.25E-07 | 0.001808 | 3.81E-02 | 1.09E-03 | 1.71E-02 |
| 3768650 | STAM2 | 11993811 | FGF20 | 9.20E-10 | 4.53E-06 | 8.71E-05 | 2.52E-06 | 1.18E-01 | 3.25E-08 | 0.000115 | 1.25E-03 | 9.91E-05 | 8.50E-01 |
| 785915 | GCNT1 | 11713331 | PRICKLE2 | 1.30E-09 | 5.34E-05 | 5.01E-01 | 3.64E-05 | 3.37E-04 | 2.95E-07 | 3.82E-05 | 7.13E-05 | 4.26E-05 | 3.70E-02 |
| 785916 | GCNT1 | 11713331 | PRICKLE2 | 1.37E-09 | 6.08E-05 | 5.08E-01 | 4.21E-05 | 4.32E-04 | 5.51E-07 | 6.98E-05 | 1.31E-04 | 8.08E-05 | 6.61E-02 |
| 1202674 | RPS6KA2 | 6061796 | CDH4 | 2.46E-09 | 4.19E-05 | 3.78E-01 | 3.11E-05 | 1.12E-05 | 1.63E-08 | 0.000516 | 6.48E-03 | 3.18E-04 | 7.53E-04 |
| 1048471 | ST3GAL1 | 2830096 | APP | 2.95E-09 | 2.43E-05 | 4.55E-04 | 1.84E-05 | 1.00E-01 | 9.63E-07 | 0.001105 | 1.11E-01 | 1.09E-03 | 3.65E-03 |
| 1025951 | GALNT13 | 17568302 | FMO2 | 3.40E-09 | 3.39E-05 | 3.16E-03 | 2.36E-05 | 2.26E-01 | 9.29E-07 | 0.002402 | 3.30E-03 | 1.94E-03 | 1.39E-02 |
| 6954 | KIAA0467 | 4773873 | ABCC4 | 3.67E-09 | 3.30E-06 | 1.24E-04 | 2.25E-06 | 3.11E-03 | 4.74E-07 | 0.003416 | 5.42E-01 | 1.59E-03 | 1.36E-02 |