Table 2.
Top 20 most highly expressed cDNAs across all the libraries, and their presence in different genomes
| Contig | Cluster sizea | Gb | BLASTX description | InterPro description |
|---|---|---|---|---|
| G49202 | 2,079 | P | - | - |
| G55010 | 856 | P | - | Pyridoxal phosphate-dependent decarboxylase |
| G47667 | 833 | O | Solute carrier family 34 | Na+/Pi cotransporter |
| G27877 | 658 | O | Ammonium transporter | Rh-like protein/ammonium transporter |
| G13951 | 630 | C | Glutamate dehydrogenase | Glutamate dehydrogenase |
| G51797 | 613 | D | Alpha 3 frustulin | - |
| G52619 | 605 | O | Uric acid-xanthine permease | Xanthine/uracil/vitamin C permease |
| G44694 | 586 | D | M6 family | Aldehyde dehydrogenase |
| G20424 | 561 | O | Urea active isoform | Na+/solute symporter |
| G48027 | 545 | P | - | - |
| G48315 | 479 | V | Choline carnitine betaine transporter | BCCT transporter |
| G176.1 | 463 | O | Alternative oxidase | Alternative oxidase |
| G29456 | 379 | C | Glyceraldehyde-3- phosphate dehydrogenase | Glyceraldehyde 3-phosphate dehydrogenase |
| G49064 | 358 | H | - | Na+/H+ antiporter NhaC |
| G49151 | 353 | D | Nucleoside diphosphate epimerase | NmrA-like |
| G49211 | 346 | P | - | - |
| C358 | 344 | V | Periplasmic l-amino acid catalytic subunit | - |
| G30648 | 342 | V | Light harvesting protein | Chlorophyll A-B binding protein |
| G23629 | 333 | C | Calcium transporting ATPase | E1-E2 ATPase-associated region |
| G45835 | 316 | V | - | Sterol-sensing 5TM box |
aCluster size of contig. bConserved in different representatives from eukaryotic genomes (e-value cutoff 10-5; more than 30% identity and 50% coverage): C, core (plant/animal/diatom); D, diatom (P. tricornutum and T. pseudonana); O, animal (opisthokonts); P, Phaeodactylum tricornutum; V, plant (Viridiplantae).