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. Author manuscript; available in PMC: 2010 Sep 27.
Published in final edited form as: Proteomics. 2009 Mar;9(5):1274–1292. doi: 10.1002/pmic.200800354

Table 2.

The List of Proteins with the Ratio ≤05

Description IPI ID Average Ratio
Average±SD
Quantification
Peptide Num
UniProtKB
ID/AC
Gene ID
Alcohol dehydrogenase class 4 mu/sigma chain IPI00324743.1 0.38 ±0.03 3 P41682 171178
Amidophosphoribosyltransferase precursor IPI00198619.1 0.43±NA 1 P35433 117544
APEX (Fragment) IPI00200918.1 0.48 ±NA 1 Q99PF3 79116
Capping protein IPI00464670.1 0.39 ±0.00 2 Q6AYC4 297339
CD14 antigen IPI00231949.5 0.24±NA 1 Q63691 60350
Galectin-3 IPI00194341.4 0.44 ±0.01 5 P08699 83781
Glutaredoxin-1 IPI00231191.6 0.49 ±0.07 2 Q9ESH6 64045
Mevalonate kinase IPI00214563.1 0.20 ±NA 1 P17256 81727
Minichromosome maintenance protein 7 IPI00371012.2 0.49±0.07 4 Q1PS21 288532
Mtap6 protein (Fragment) IPI00212447.2 0.31±NA 1 Q6AYX8 29457
N-myc downstream regulated gene 1 IPI00421389.1 0.38±NA 1 Q6JE36 299923
NORBIN IPI00205396.1 0.44±NA 1 O35095 89791
Pleckstrin homology-like domain, family B,
member 1
IPI00207827.2 0.36±NA 1 Q63312 171434
PREDICTED: cadherin 11 IPI00211883.2 0.43 ±0.02 2 Q9JIW2 84407
PREDICTED: similar to 2610304F09Rik protein IPI00358454.2 0.46 ±0.00 2 307527
PREDICTED: similar to Coronin, actin binding
protein 1C
IPI00388015.3 0.33±0.46 3 B2RYG0 501841
PREDICTED: similar to DNA replication licensing
factor MCM3
IPI00361669.2 0.44±NA 1 367976
PREDICTED: similar to DNA replication licensing
factor MCM3
IPI00371781.2 0.44±NA 1 316273
PREDICTED: similar to Filamin B IPI00373752.2 0.47 ±0.12 6 306204
PREDICTED: similar to Lmnb2 protein IPI00366190.3 0.42 ±NA 1 299625
PREDICTED: similar to Stromal cell-derived factor
2 precursor
IPI00369655.1 0.38±NA 1 287470
PREDICTED: similar to TF-1 apoptosis related
protein 19
IPI00193547.2 0.33 ±NA 1 292814
PREDICTED: similar to Tripartite motif protein 47 IPI00361534.1 0.3±NA 1 690374
PREDICTED: similar to Williams-Beuren
syndrome deletion transcript 9 homolog
IPI00370333.1 0.29±NA 1 Q2V6G6 368002
Prostaglandin F2 receptor negative regulator
precursor
IPI00208280.2 0.47 ±0.27 3 Q62786 29602
prostaglandin-endoperoxide synthase 1 IPI00567836.1 0.48±0.01 3 Q66HK3 24693
Proteasome inhibitor PI31 subunit IPI00391791.2 0.27±NA 1 Q5XIU5 682071
Reck reversion-inducing-cysteine-rich protein with
kazal motifs
IPI00358750.2 0.48 ±NA 1 313488
Ribonucleotide reductase M1 IPI00361151.2 0.47±NA 1 Q5U2Q5 365320
RNA terminal phosphate cyclase domain 1 IPI00201443.1 0.37 ±NA 1 Q68FS8 295395
RNA-binding motif protein 3 IPI00367437.3 0.50 ±0.00 2 Q925G0 114488
Small nuclear ribonucleoprotein polypeptide A IPI00364044.3 0.20 ±0.00 2 Q5U214 292729
Testis derived transcript IPI00560148.2 0.4±NA 1 Q2LAP6 500040
Transcriptional repressor CTCF IPI00207172.2 0.47±NA 1 Q9R1D1 83726
UDP-glucose 6-dehydrogenase IPI00195803.1 0.44±0 2 O70199 83472
Wiskott-Aldrich syndrome protein-interacting
protein
IPI00470232.5 0.3±NA 1 Q6IN36 117538
Xanthine dehydrogenase/oxidase IPI00231694.6 0.50 ±0.07 3 P22985 497811