Table 2.
Table 2-1. IHC and direct sequencing details (N=70) | ||||||
---|---|---|---|---|---|---|
Sample No. | IHC | H score max | Direct sequencing | Nucleotide number and sequence | Amino-acid change | |
Exon 19 deletions | 56 | Del | 400 | Del | 2236-2250del15 | del E746–A750 |
49 | Del | 280 | Del | 2235-2249del15 | del E746–A750 | |
41 | Del | 230 | Del | 2235-2249del15 | del E746–A750 | |
46 | Del | 205 | Del | 2235-2249del15 | del E746–A750 | |
69 | Del | 190 | Del | 2235-2249del15 | del E746–A750 | |
16 | Del | 110 | Del | 2235-2249del15 | del E746–A750 | |
3 | Del | 100 | Del | 2235-2249del15 | del E746–A750 | |
43 | Del | 100 | Del | 2235-2249del15 | del E746–A750 | |
61 | Del | 100 | Del | 2235-2249del15 | del E746–A750 | |
27 | Wt | 5 | Del | 2235-2249del15 | del E746–A750 | |
4 | Wt | 0 | Del | 2236-2250del15 | del E746–A750 | |
42 | Wt | 0 | Del | 2239-2253del15* | delL747-T751 | |
50 | Wt | 0 | Del | 2239-2253del15* | delL747-T751 | |
67 | Wt | 0 | Del | 2239-2253del15* | delL747-T751 | |
24 | Wt | 0 | Del | 2240-2257del18* | del L747-P753insS | |
40 | Wt | 0 | Del | 2240-2257del18* | del L747-P753insS | |
55 | Wt | 0 | Del | 2240-2257del18* | del L747-P753insS | |
18 | Wt | 0 | Del | 2253-2276del24* | S752-I759 | |
Exon 21 mutations | 32 | L858R | 370 | L858R or Wt | 2573 T>K | L858R or Wt |
68 | L858R | 360 | L858R | 2573 T>G | L858R | |
1 | L858R | 240 | L858R | 2573 T>G | L858R | |
66 | L858R | 240 | L858R | 2573 T>G | L858R | |
51 | L858R | 230 | L858R or Wt | 2573 T>K | L858R or Wt | |
31 | L858R | 200 | L858R or Wt | 2573 T>K | L858R or Wt | |
12 | L858R | 100 | L858R or Wt | 2573 T>K | L858R or Wt | |
21 | L858R | 80 | L858R | 2573 T>G | L858R | |
60 | L858R | 20 | L858R | 2573 T>G | L858R | |
65 | L858R | 215 | Wt | |||
58 | L858R | 180 | Wt | |||
62 | Wt | 0 | L858R | 2573 T>G | L858R | |
5 | Wt | 0 | L858R or Wt | 2573 T>K | L858R or Wt | |
33 | Wt | 0 | L858R or Wt | 2573 T>K | L858R or Wt |
Table 2-2. Immunoreactivity of E746-A750 specific and L858R specific antibodies | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Sample No. | IHC | Amino acid change | H score | Staining area (%) per intensity | ||||||
max | mean | 0 | 1+ | 2+ | 3+ | 4+ | ||||
E746-A750 specific antibody | 56 | Del | del E746–A750 | 400 | 400 | 0 | 0 | 0 | 0 | 100 |
49 | Del | del E746–A750 | 280 | 225 | 0 | 4 | 68 | 28 | 0 | |
41 | Del | del E746–A750 | 230 | 116.7 | 50 | 0 | 33 | 17 | 0 | |
46 | Del | del E746–A750 | 205 | 198.3 | 2 | 0 | 96 | 2 | 0 | |
69 | Del | del E746–A750 | 190 | 163.3 | 0 | 67 | 13 | 10 | 10 | |
16 | Del | del E746–A750 | 110 | 105 | 0 | 95 | 5 | 0 | 0 | |
3 | Del | del E746–A750 | 100 | 36.7 | 65 | 33 | 2 | 0 | 0 | |
43 | Del | del E746–A750 | 100 | 33.3 | 67 | 33 | 0 | 0 | 0 | |
61 | Del | del E746–A750 | 100 | 63.3 | 37 | 63 | 0 | 0 | 0 | |
27 | Wt (FN) | del E746–A750 | 5 | 3.33 | 98 | 2 | 0 | 0 | 0 | |
L858R specific antibody | 32 | L858R | L858R or Wt | 370 | 350 | 0 | 0 | 0 | 50 | 50 |
68 | L858R | L858R | 360 | 256.7 | 0 | 0 | 63 | 17 | 20 | |
1 | L858R | L858R | 240 | 138.3 | 10 | 62 | 8 | 20 | 0 | |
66 | L858R | L858R | 240 | 230 | 0 | 0 | 70 | 30 | 0 | |
51 | L858R | L858R or Wt | 230 | 173.3 | 0 | 37 | 53 | 10 | 0 | |
31 | L858R | L858R or Wt | 200 | 133.3 | 0 | 67 | 33 | 0 | 0 | |
12 | L858R | L858R or Wt | 100 | 66.7 | 33 | 67 | 0 | 0 | 0 | |
21 | L858R | L858R | 80 | 36.7 | 63 | 37 | 0 | 0 | 0 | |
60 | L858R | L858R | 20 | 16.7 | 83 | 17 | 0 | 0 | 0 | |
65 | L858R (FP) | Wt | 215 | 138.3 | 0 | 0 | 94 | 3 | 3 | |
58 | L585R (FP) | Wt | 180 | 146.7 | 0 | 55 | 43 | 2 | 0 |
other deletions; L858R = 2573 T>G, and 2573 T>K (K = G or T)