Table 2. Oligonucleotides used for Electrophoretic mobility shift assays.
SNP | Allele | F/R* | Sequence |
rs16972197 | G | F | 5′-GCTTTCCCTTGACTGTGCCAATCC-3′ |
G | R | 5′-GGATTGGCACAGTCAAGGGAAAGC-3′ | |
C | F | 5′-GCTTTCCCTTCACTGTGCCAATCC-3′ | |
C | R | 5′-GGATTGGCACAGTGAAGGGAAAGC-3′ | |
rs16972194 | G | F | 5′-AAACTTCTTACTTAAGACTGTGTGGAAATGTAGAGT-3′ |
G | R | 5′-ACTCTACATTTCCACACAGTCTTAAGTAAGAAGTTT-3′ | |
A | F | 5′-AAACTTCTTACTTAAGACTGTATGGAAATGTAGAGT-3′ | |
A | R | 5′-ACTCTACATTTCCATACAGTCTTAAGTAAGAAGTTT-3′ | |
rs56124946 | C | F | 5′-GCTGCCTCTCCCTCGCCTCAGCTGTCTTT-3′ |
C | R | 5′-AAAGACAGCTGAGGCGAGGGAGAGGCAGC-3′ | |
G | F | 5′-GCTGCCTCTCCCTGGCCTCAGCTGTCTTT-3′ | |
G | R | 5′-AAAGACAGCTGAGGCCAGGGAGAGGCAGC-3′ |
*orientation of oligo: Forward (F)/Reverse (R) strand.