Table 1. Number of miRNAs that changed in brain and blood 24 h after each experimental condition as compared to untouched controls (C).
Comparison | Up- or downregulated | Sample | No. of miRNA detectable | miRNAs regulated in both brain and blood (fold change >1.5) | No. of regulated miRNA | ||
---|---|---|---|---|---|---|---|
Fold change >1.5 | Fold change >1.5 and P<0.05 | Fold change >1.5, P<0.05 and FDR <0.05 | |||||
SI versus C | Up | Brain | 198 | miR-298, miR-503, miR-672 | 43 | 5 | 0 |
Blood | 49 | 19 | 3 | 0 | |||
Down | Brain | 85 | miR-155,a miR-362-3p | 26 | 1 | 0 | |
Blood | 103 | 44 | 1 | 0 | |||
I versus C | Up | Brain | 168 | miR-10a, miR-182, miR-200b, miR-298 | 43 | 6 | 1 |
Blood | 33 | 16 | 3 | 1 | |||
Down | Brain | 115 | miR-155,a miR-362-3p,a miR-223, miR-210 | 22 | 5 | 2 | |
Blood | 119 | 92 | 38 | 19 | |||
SH versus C | Up | Brain | 143 | miR-148b, miR-503 | 36 | 3 | 0 |
Blood | 76 | 19 | 3 | 0 | |||
Down | Brain | 140 | miR-10b,a miR-203, miR-362-3p | 27 | 8 | 4 | |
Blood | 76 | 36 | 3 | 2 | |||
B versus C | Up | Brain | 163 | miR-298,a miR-200b,a miR-205,a miR-345, miR-423-5p | 34 | 6 | 0 |
Blood | 104 | 39 | 4 | 1 | |||
Down | Brain | 120 | None | 31 | 7 | 2 | |
Blood | 48 | 20 | 1 | 0 | |||
LB versus C | Up | Brain | 150 | miR-298,a miR-423-5p,a miR-10a, miR-345-5p, miR-674 | 34 | 6 | 0 |
Blood | 87 | 30 | 6 | 1 | |||
Down | Brain | 133 | miR-155, miR-20b-3p, miR-200a | 28 | 6 | 1 | |
Blood | 65 | 33 | 6 | 0 | |||
T versus C | Up | Brain | 234 | miR-107,a miR-200b, miR-331-5p, miR-672 | 69 | 12 | 0 |
Blood | 29 | 17 | 2 | 0 | |||
Down | Brain | 49 | miR-155,a miR-188-5pa | 19 | 3 | 3 | |
Blood | 123 | 63 | 10 | 0 | |||
K versus C | Up | Brain | 104 | miR-298a | 21 | 1 | 0 |
Blood | 47 | 15 | 2 | 0 | |||
Down | Brain | 179 | miR-155,a miR-29c, miR-34b-3p, miR-98, miR-122, miR-203, miR-450a | 39 | 9 | 4 | |
Blood | 105 | 43 | 1 | 0 |
miRNA, microRNA; RT-PCR, real-time PCR.
Experimental conditions included untouched control (C), sham ischemia (SI), ischemia (I), sham hemorrhage (SH), fresh blood (B), lysed blood (LB), thrombin (T) and kainate seizures (K).
The columns indicate the numbers of miRNAs that were detectable by RT-PCR; had a fold change >1.5; a fold change >1.5 and P<0.05; a fold change >1.5, P<0.05 and FDR <0.05.
Represents miRNAs regulated in both brain and blood and had a fold change >2.