Table 1.
RTCGDd | ||||||||
---|---|---|---|---|---|---|---|---|
Total | ||||||||
CIS no. | Chromosome positiona (Chr [Mb]) | NCBI accession | Gene description | Eµ-c-Mycb (low mdm2) | Eµ-c-Mycc (wild-type mdm2) | RIS | Tn-IS | |
CIS with known cancer genes | 1.1 | 10 [20] | NM_033597 | myb | 11 | 2 | 61 | 0 |
1.2 | 5 [107] | NM_010278 | gfi1 | 6 | 3 | 78 | 0 | |
1.3 | 17 [29] | NM_008842 | pim1 | 6 | 2 | 34 | 0 | |
1.4 | 2 [18] | NM_007552 | pcgf4/bmi1 | 6 | 4 | 17 | 0 | |
1.5 | 2 [117] | NM_011246 | rasgrp1 | 3 | 4 | 31 | 3 | |
1.6 | 11 [69] | NM_011640 | trp53 | 3 | 0 | 4 | 0 | |
1.7 | 2 [152] | NM_009743 | bcl-2l1/bcl-x | 3 | 0 | 7 | 0 | |
1.8 | 16 [92] | NM_009821 | runx1 | 2 | 2 | 9 | 0 | |
1.9 | 19 [37] | NM_008245 | hhex | 2 | 0 | 48 | 0 | |
CIS with candidate cancer genes | 1.10 | 5 [76] | NM_010612 | kdr/flk-1/vegfr2 | 3 | 0 | 10 | 2 |
1.11 | 11 [74] | NM_001002764 | smg6 | 2 | 0 | 9 | 0 | |
1.12 | 9 [71] | NM_011544 | tcf12, heb | 3 | 0 | 4 | 0 | |
1.13 | 2 [158] | NM_153089 | ppp1r16b | 2 | 0 | 4 | 0 | |
1.14 | 6 [72] | NM_138592 | usp39 | 2 | 0 | 3 | 0 | |
1.15 | 13 [54] | NM_009946 | cplx2 | 2 | 0 | 2 | 0 | |
1.16 | 10 [80] | NM_008655 | gadd45β | 3 | 0 | 1 | 0 | |
1.17 | 13 [118] | NM_010330 | emb | 2 | 0 | 0 | 0 | |
1.18 | 9 [119] | NM_153287 | axud1 | 2 | 0 | 0 | 0 |
Chromosomal location of common insertion site (CIS) based on UCSC genome mm8 browser. The chromosome number is followed by the position in megabases [Mb].
Number of M-MuLV retroviral insertions at the indicated locus identified in tumors from Eµ-c-myc mice with a subphysiological level of mdm2 (Eµ-c-myc; mdm2+/puro, Eµ-c-myc; mdm2+/Δ7-12 mice, and Eµ-c-myc; mdm2puro/Δ7-12; n = 74, this study).
Number of M-MuLV retroviral insertion at the indicated locus identified in tumors from Eµ-c-myc mice with wild-type levels of mdm2 (n = 21; Mikkers et al. [2002]14). Data obtained from Retroviral Tagged Cancer Gene Database (RTCGD).
Total number of retroviral (RIS) and transposon (Tn-IS) insertions at the indicated locus deposited in the RTCGD as of August 2006.