Table 6.
Highly significant haplotype windows
| Chromosome | First SNP in window | Kb map location | p-value | PC corrected p-value |
|---|---|---|---|---|
| 9 | rs7850685 | 99803.7 | 2.14E-07 | 8.215372E-07 |
| 9 | rs13049 | 99862.9 | 1.95E-06 | 1.898616E-06 |
| 22 | rs178260 | 19654.3 | 7.51E-06 | 6.082905E-06 |
| 1 | rs10158916 | 79946.2 | 8.43E-06 | 5.806333E-05 |
| 22 | rs178259 | 19654.2 | 1.20E-05 | 1.794159E-05 |
| 15 | rs17264145 | 88904.7 | 1.35E-05 | 5.959549E-05 |
| 5 | rs13155209 | 10841.9 | 1.43E-05 | 2.769336E-05 |
| 1 | rs12144807 | 79945.4 | 1.44E-05 | 6.107985E-05 |
| 9 | rs10967991 | 27564.8 | 1.49E-05 | 1.232903E-04 |
| 9 | rs872251 | 99797.2 | 1.60E-05 | 5.476211E-05 |
| 9 | rs551120 | 134879 | 1.72E-05 | 3.428334E-05 |
| 22 | rs9613019 | 24504.4 | 1.84E-05 | 4.384690E-06 |
| 15 | rs12911150 | 86469.7 | 2.05E-05 | 5.855712E-05 |
| 16 | rs17618203 | 65704.5 | 2.55E-05 | 9.370586E-06 |
| 5 | rs12186813 | 10855.7 | 2.67E-05 | 4.666928E-05 |
| 19 | rs11882629 | 11319.7 | 2.97E-05 | 8.237138E-05 |
| 1 | rs11591084 | 80077.3 | 3.23E-05 | 3.804365E-05 |
| 9 | rs4740559 | 14120.2 | 3.29E-05 | 2.475267E-05 |
| 1 | rs722589 | 79946.9 | 3.49E-05 | 2.592247E-04 |
| 2 | rs340764 | 16321.5 | 3.67E-05 | 5.459454E-05 |
| 9 | rs3132315 | 136567 | 3.68E-05 | 1.894568E-05 |
| 9 | rs10967992 | 27572 | 3.76E-05 | 4.216994E-04 |
| 1 | rs17422551 | 79964.9 | 3.78E-05 | 2.412767E-04 |
| 7 | rs16868596 | 88502.2 | 3.80E-05 | 5.435478E-05 |
| 12 | rs1993498 | 10689.9 | 3.86E-05 | 5.445096E-05 |
Top 25 results by significance for haplotype omnibus tests.