Table 3. Concerted regulation of expression of miRNAs in non-inflamed and inflamed CD and UC tissues.
Overexpressed miRNA | |||
UC | CD | ||
Non-inflamed | Inflamed | Non-inflamed | Inflamed |
Cluster #7 : | Cluster #7 : | Cluster #7 : | Cluster #13 : |
mir-15a | mir-7 | mir-7 | mir-26a |
mir-26a | mir-26a | mir-26a | mir-29b |
mir-29a | mir-29a | mir-30b | mir-126* |
mir-29b | mir-29b | mir-30c | mir-155 |
mir-30c | mir-31 | mir-127-3p | mir-127-3p |
mir-126* | mir-126* | mir-155 | mir-185 |
mir-127-3p | mir-127-3p | mir-223 | mir-196a |
mir-324-3p | mir-135b | mir-324-3p | mir-324-3p |
mir-324-3p | mir-378 | ||
Cluster #13 : | |||
mir-29a | |||
mir-29b | |||
mir-126* | |||
mir-196a |
Alterations in miRNA expression (8 UC, 8 CD patients) were clustered using a K-Means algorithm (computed on-line on the GenePattern server), independently in each IBD and for each state of the disease. Clusters that encompass several miRNAs with similarly up-regulated expression are highlighted (bold characters).