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. 2010 Oct 7;5(10):e13213. doi: 10.1371/journal.pone.0013213

Table 2. qPCR validation of 11 genes that were differentially regulated in the microarray analysis.

RNA samples submitted to microarray and qPCR analysis RNA samples submitted only to qPCR analysis
ΔCta ΔCta
Gene Accession Endometrium Blood Ste ΔΔCtb Foldchange P MCc Endometrium Blood Ste ΔΔCtb Foldchange P MCc
PAG10 NM_176621 8.2 18.7 0.1 −10.4 1389 0.0003 Confirmed 7.5 19.1 1.2 −11.5 2964.0 0.002 Confirmed
GZMA NM_001001142 6.8 16.5 0.9 −9.8 867 0.0112 Confirmed 7.7 16.1 1.5 −8.3 322.5 0.016 Confirmed
HMOX1 NM_001014912 12.4 16.8 0.1 −4.4 22 0.0002 Confirmed 11.9 16.0 1.3 −4.1 17.5 0.000 Confirmed
MRC1 XM_001252128 15.7 18.4 0.5 −2.7 6.7 0.0009 Confirmed 15.7 18.6 0.6 −3.0 7.8 0.065 Same direction
TSGA14 XM_583431 13.0 14.5 0.1 −1.5 2.9 0.0064 Confirmed 13.1 14.2 1.1 −1.1 2.1 0.523 Confirmed
CD16a NM_001077402 10.1 11.0 0.2 −0.9 1.9 0.0115 Confirmed 11.4 11.1 1.4 0.3 1.2 0.889 Opposite direction
CD163 XM_613380 12.4 13.1 0.2 −0.7 1.6 0.0115 Confirmed 12.1 12.0 1.4 0.2 1.1 0.938 Opposite direction
PTX3 XM_614752 16.4 16.9 0.2 −0.5 1.4 0.0156 Opposite direction 17.4 16.4 0.6 1.0 2.0 0.351 Same direction
MCP1 NM_174006 15.2 15.3 0.1 0.0 1.0 0.0002 Opposite direction 15.4 14.5 2.3 0.8 1.8 0.814 Same direction
RNASE6 NM_174594 14.5 16.1 0.5 −1.6 3.0 0.1567 Same direction 11.1 14.2 1.0 −3.2 9.0 0.079 Same direction
SLCO2B1 NM_174843 15.8 18.7 0.1 −2.8 7.2 0.0887 Same direction 14.1 19.1 3.4 −5.0 31.3 0.365 Same direction
a

ΔCt was calculated by the subtraction of the Ct value for the target gene from the Ct value for the housekeeping gene.

b

ΔΔCt was calculated by the subtraction of the ΔCt value for the endometrium from the ΔCt value for the blood.

c

MC  =  Microarray confirmation.