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. Author manuscript; available in PMC: 2011 Nov 1.
Published in final edited form as: Prog Nucl Magn Reson Spectrosc. 2010 Jul 30;57(4):381–419. doi: 10.1016/j.pnmrs.2010.07.001

Table 3.

Full Quadrature Reduced Dimensionality Experiments

Measurement Sample Experiment(s) Time
(hrs.)
Ref.
NOE-derived distance
restraints
Rhodobacter capsulatus
ferrocytochrome c2
(4,3)-D 13C/15N-NOESY
(4,3)-D 15N/15N-NOESY
not
given
[119]
Backbone assignment residues 1-68 of merA
from Ralstonia
metallidurans CH34
(3,2)-D HNCA,
HN(CO)CA, HN(CA)CB,
HN(COCA)CB,
HN(CA)HA,
HN(COCA)HA
14 [50]
Backbone assignment 1.5 mM ubiquitin (3,2)-D HNCA, HN(CO)CA
(4,2)-D HACANH
not
given
[55]
Solid-state backbone
assignment
histidine (3,2)-D MAS NCC not
given
[128]
Backbone assignment 2 mM ubiquitin (5,2)-D HACACONH 2.3 [52]
Backbone assignments 1.5 mM ubiquitin
1.1 mM 21 kDa bovine
S100A1
(4,2)-D HNCACB and
HN(CO)CACB, with Cα and
Cβcoevolved as an MQ
coherence producing only
the DQ (Cα+Cβ) peak
Not
given
[120]
Backbone assignments 1.5 mM ubiquitin (3,2)-D HNCO, HNCA,
HN(CO)CA, H(N)COCA;
(4,2)-D HNCOCA (all MQ)
not
given
[121]
Backbone and sidechain
assignments
1.4 mM ubiquitin (3,2)-D HNCO, HNCACB,
HN(CO)CACB,
HN(CA)CO, HNCA,
HN(CO)CA, CBCANH,
CBCA(CO)NH,
C(CCO)NH, H(CCCO)NH
18 [129]
Backbone and Cβ assignment 2 mM ubiquitin,
1 mM TT212
(5,2)-D intra-HACACONN
and HACACONH; (5,3)-D
intra-<HACA,CO>NH and
HACACONH; (4,3)-D
intra-<CBCA,CO>NH and
CBCACONH
42.6,
62.6
[122]
Backbone and sidechain
assignments
1 mM 17 kDa ER75,
1 mM 13 kDa PfR13,
2 mM ubiquitin
(4,2)-D HCCH; (4,3)-D
Cα/βCα(CO)NH, L-
HN(CO)Cα/βCα, HNCα/βCα
and L-HNCα/βCα; (5,3)-D
Hα/βCα/βCα(CO)NH and
HCCCH; (6,3)-D
Hα/βCα/βCαCONH
224,
32,
68.8
[124]
Backbone and sidechain
assignments [also reported
structures using non-GFT
time-shared NOESY]
8 targets from the
NESH consortium, at
~1 mM each
(4,3)-D Hα/βCα/β(CO)NH
and HCCH
[plus previously published
(4,3)-D Cα/βCα(CO)NH, L-
HN(CO)Cα/βCα; and (5,2)-D
HACACONH]
26 to
214
[130]
Structure determination:
backbone assignments by
previously published protocols;
distance constraints from GFT
NOESY
1 mM 14 kDa YqfB (4,3)-D [HCali/HN]-
NOESY-[CHali/NH], which
is a time-shared NOESY
experiment detecting
HCali HCali, HN HCali
HCali HN and
HN HN [assignment by
previously published
experiments]
16.9+,
39
[125]
Dynamics of aromatic rings 21 kDa HR41, 13 kDa
MAR11
(4,3)-D L-HCCH and L-
TROSY-HCCH
24,
0.42
[131]
Backbone assignments 0.8 mM 17 kDa yqbG,
13.5 kDa rps24e, 8
kDa protein Z-domain,
ubiquitin, 13.5 kDa
rps24e
various combinations of
(5,3)-D HN{NCO} {Cα/βCα},
intra-HN{<N,CO>} {Cα/βCα},
intra-HN{<N,CO>} {Cα/βHα},
{HαCα}{CON}NH
HN{NCα}{Cα/βCα},
HN{N(CO)Cα}{Cα/βCα} and
(6,3)-D
{Hα/βCα/βCα}{CON}NH, with
and without L-optimization
and/or TROSY
7 to 44 [109]
Residual dipolar couplings 8 kDa protein Z-
domain
(6,2)-D (HA-CA-CO)-N-
HN
24 [123]
Sidechain assignments Nck Sh3-1 (4,3)-D HC(CO)NH-
TOCSY, with nonuniform
sampling and MaxEnt
reconstruction in both the
combined HC dimension
and the conventional N
dimension
48 [127]
Membrane protein backbone
And sidechain assignments
Subunit c of F1F0 ATP
synthase in micelles
previously published (3,2)-
D HNNCO; (4,3)-D L-
HNCα/βCα, L-HN(CO)Cα/βCα
HCCH; (4,2)-D
HACA(CO)NH; (5,3)-D
intra-HN{<N,CO>}{Cα/βCα}
and {Cα/βCα}{CON}NH
118 [132]
Scalar coupling constants 9.5 kDa M-crystallin
16.2 kDa Eh-CaBP
(3,2)-D quantitative-J
HNHA, HNHB
1.5 to
18
[133]
Pseudocontact shifts 8.5 kDa calbindin previously published (3,2)-
D HNCO, HN(CO)CA,
HN(COCA)CB, HNHA
7.5 [134]
NOE-derived distance
restraints
1.4 mM ubiquitin (4,3)-D time-shared NOESY
detecting HN CH and
HN NH
48 [126]

(n,m)-D indicates that n dimensions of correlations are collected with m independent evolution times. Underlining indicates coevolved nuclei; underlined nuclei grouped in {curly braces} indicate independen sets of coevolved nuclei. (Parentheses) indicate nuclei through which magnetization is passed, without evolving chemical shifts. <Angled brackets> indicate nuclei involved in bifurcated magnetization transfer. intra- indicates that only the intraresidue peaks are detected. [Square brackets] indicate time-shared evolution of two nuclei, with diagonal slashes separating the nuclei or sets of nuclei that evolve independently. L- indicates that longitudinal relaxation optimization is used. Hyphens between nuclei indicate that the coupling between the nuclei are evolved. The names for some experiments have been adjusted from the original publications to maintain consistency in nomenclature.

The measurement times represent the time reported for running the set of experiments on the sample, or a range of times for multiple samples. Where multiple individual times are listed on separate lines, they correspond to the samples listed in the sample column, and are in the same order. For the YqfB structure determination, a+b indicates a hours for the assignment experiments and b hours for the NOESY.