Table 4.
Measurement | Sample | Experiment(s)† | Reconst. Alg.‡ |
Time (hrs.) |
Ref |
---|---|---|---|---|---|
Backboneassignment | 1mMubiquitin | (3,2)-D HNCO | LV | 0.49 | [53] |
Backboneassignment | 1mMubiquitin 1.7 mM HasA |
(3,2)-D HNCA, HN(CO)CA,HNCO |
LV | 1.5 0.56 |
[141] |
Backboneassignment | 1mMubiquitin | (4,2)-D HNCOCA | LV | 0.63 | [136] |
Backboneassignment | 3mMnucleaseA inhibitor |
(4,2)-D HNCOCA | LV, BP | 0.58 | [137] |
Backboneassignment | 2mMproteinGB1 domain |
(5,2)D HACACONH | LV | 1.45 | [43] |
Backboneassignment | 3 mMnucleaseA inhibitor |
(3,2)-D HNCA | LV, BP | 1.0 | [70] |
Backboneassignment | 0.94 mM HCA II 0.9 mMcalbindin D28K |
(4,2)-D HNCACB, HN(CO)CACB, intra- HNCACB, HNCACO, HNCOCA, HNCOi-1CAi HACA(CO)NH, HACANH |
LV, BP, HBLV |
307.2 | [72] |
Backboneassignment | 1.7 mM HasA | (3,2)-D HNCO | BP with CLEAN |
0.83 | [138] |
Backboneassignment | 1.7 mM HasA | (3,2)-D HNCO | LV, BP, Others |
not given |
[152] |
Sidechainassignments | 1mMproteinGB1 domain |
(4,3)-D HC(CCO)NH and intra-HC(C)NH |
LV | 47.5 | [142] |
NOESY | 0.9 mM HCA II | (4,2)-D methyl-amide NOESY detecting CH3 NH |
FBP | 88 | [71] |
(n,m)-D indicates that n dimensions of correlations are collected with m independent evolution times. Underlining indicates coevolved nuclei; underlined nuclei grouped in {curly braces} indicate independent sets of coevolved nuclei. (Parentheses) indicate nuclei through which magnetization is passed, without evolving chemical shifts. intra- indicates that only the intraresidue peaks are detected. The names for some experiments have been adjusted from the original publications to maintain consistency in nomenclature.
LV = lower-value, BP = backprojection, HBLV = hybrid backprojection/lower-value, FBP = filtered backprojection. Ridge and Mandelshtam’s method [73] has not been demonstrated on experimental data. Yoon and coworkers reported several methods which we have classified as “iterative model-fitting” and which are discussed in that section.