Table I. TLR and reference gene primer sequences.
Symbol | Accession a | Gene name | Sequences (5′ - 3′) b | L c |
---|---|---|---|---|
GAPDH | NM_002046 | Glyceraldehyde-3-phosphate dehydrogenase | F: AAGGTCGGAGTCAACGGATTT R: ACCAGAGTTAAAAGCAGCCCTG |
66 |
RPLP0 | NM_001002 | Large ribosomal protein P0 | F: CCTCATATCCGGGGGAATGTG R: GCAGCAGCTGGCACCTTATTG |
95 |
TLR1 | NM_003263.3 | Human toll-like receptor 1 | F: AGGCCTTGTCTATACACCAAGTTGT R: CGTGTACCAGACACTGTGAAATTTT |
112 |
TLR2 | NM_003264.3 | Human toll-like receptor 2 | F: AACCGGAGAGACTTTGCTCA R: CCACTGACAAGTTTCAGG CA |
91 |
TLR3 | NM_003265.2 | Human toll-like receptor 3 | F: CCTGGTTTGTTAATTGGATTAACGA R: TGAGGTGGAGTGTTGCAAAGG |
82 |
TLR4 | NM_138554.2 | Human toll-like receptor 4 | F: GGACTGGGTAAGGAATGAGCTAGTA R: CACACCGGGAATAAAGTCTCTGT |
94 |
TLR6 | NM_006068.2 | Human toll-like receptor 6 | F: TGTACACCGTGTTTTCTGAGATGA R: GAAAACGTTCTGGGTAAAGTTCAAA |
125 |
TLR7 | NM_016562.3 | Human toll-like receptor 7 | F: AAGCCCTTTCAGAAGTCCAAGTT R: GGTGAGCTTGCGGGTTTGT |
91 |
TLR8 | NM_016610.2 | Human toll-like receptor 8 | F: GCTGCTGCA AGTTAC GGAAT R: CGC ATAACTCACAGGAACCA |
118 |
TLR9 | NM_017442.2 | Human toll-like receptor 9 | F: TGAAGACTTCAGGCCCAACTG R: TGCACGGTCACCAGGTTGT |
75 |
GenBank accession number.
Sources for primer sequences were RTPrimerDB (http://medgen.ugent.be/rtprimerdb/, GAPDH and RPLP0) 21, qPrimerDepot (http://primerdepot.nci.nih.gov/, TLR2 and TLR8) 20, and Rebbapragada et al. (TLR1, TLR3, TLR4, TLR6, TLR7, and TLR9) 22.
Amplicon length (bp)