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. 2010 Nov;51(11):3103–3116. doi: 10.1194/jlr.M005041

TABLE 2.

Secondary structures of PPARα and L-FABP proteins in the presence of glucose metabolites

Regular α-helices Distorted α-helices Regular β-sheets Distorted β-sheets Turns Unordered
% % % % % %
PPARα and L-FABP 21.1 ± 0.6 14.7 ± 0.3 10.5 ± 0.4 8.2 ± 0.2 20.9 ± 0.4 25.0 ± 0.4
0.0006 mM Glucose 9.7 ± 0.1a 9.9 ± 0.2a 19.7 ± 0.4a 9.0 ± 0.6c 21.6 ± 0.2 28.7 ± 0.2a
Theoretical 9.4 ± 0.2 9.4 ± 0.2 20.1 ± 0.4 9.9 ± 0.2 21.8 ± 0.2 27.7 ± 0.5
0.006 mM Glucose 10.2 ± 0.4a 10.3 ± 0.3a 19.3 ± 0.4a 10.2 ± 0.2a 21.4 ± 0.3 27.5 ± 0.6b
Theoretical 9.68 ± 0.39 10.4 ± 0.3 19.7 ± 0.3 10.1 ± 0.2 22.0 ± 0.5 27.2 ± 0.6
0.06 mM Glucose 11.8 ± 0.1a 10.7 ± 0.1a 16.3 ± 0.7a 9.3 ± 0.1a 22.9 ± 0.3c 28.8 ± 0.2a
Theoretical 9.8 ± 0.3d 9.4 ± 0.2d 19.7 ± 0.6e 10.1 ± 0.1d 21.7 ± 0.3 27.7 ± 0.3f
0.6 mM Glucose 12.2 ± 0.1a 10.4 ± 0.1a 16.5 ± 1.0a 9.5 ± 0.2a 22.0 ± 0.7 28.8 ± 0.6a
Theoretical 15.6 ± 0.5d 11.9 ± 0.2d 13.50 ± 0.63f 8.7 ± 0.2e 22.2 ± 0.6 27.9 ± 0.5
6 mM Glucose 10.5 ± 0.2a 9.7 ± 0.2a 18.2 ± 0.1a 10.7 ± 0.1a 22.3 ± 0.1b 28.0 ± 0.1a
Theoretical 16.0 ± 0.6d 12.5 ± 0.2d 13.4 ± 0.3d 9.0 ± 0.1d 22.4 ± 0.5 27.3 ± 0.3
20 mM Glucose 11.1 ± 0.2a 10.3 ± 0.2a 16.7 ± 0.3a 10.9 ± 0.2a 22.9 ± 0.1a 28.0 ± 0.2a
Theoretical 8.9 ± 0.3d 9.2 ± 0.4f 19.3 ± 0.7e 12.4 ± 0.3d 22.7 ± 0.5 27.6 ± 0.4
30 mM Glucose 12.1 ± 5.3c 15.8 ± 10.3 10.0 ± 2.0 13.1 ± 0.8a 20.3 ± 2.1 38.8 ± 5.3b
Theoretical 11.0 ± 4.8 6.1 ± 1.6 12.0 ± 2.1 12.8 ± 0.6 20.1 ± 2.2 36.9 ± 4.9
0.006 mM Maltose 18.8 ± 0.9 13.3 ± 0.5 10.9 ± 0.7 9.2 ± 0.4 23.2 ± 0.5 25.4 ± 0.9
0.06 mM Maltose 18.9 ± 0.5 12.9 ± 0.6 11.4 ± 0.6 8.9 ± 0.4 22.5 ± 0.5 25.8 ± 0.5
0.6 mM Maltose 22.2 ± 1.6 16.6 ± 1.9 8.1 ± 1.2 8.7 ± 0.6 22.0 ± 1.4 22.7 ± 2.1
6 mM Maltose 18.7 ± 5.2 13.9 ± 2.9 10.1 ± 3.0 9.2 ± 2.1 23.5 ± 1.8 24.8 ± 1.5
20 mM Maltose 6.2 ± 1.2b 7.4 ± 1.2b 22.6 ± 1.6 13.8 ± 1.6b 23.4 ± 1.3 24.7 ± 1.8
G-1-P 11.0 ± 0.2a 10.2 ± 0.2a 17.9 ± 0.7a 9.68 ± 0.13a 22.1 ± 0.3c 28.1 ± 0.2a
Theoretical 9.6 ± 0.3e 9.7 ± 0.4 20.3 ± 0.8f 9.7 ± 0.3 21.8 ± 0.3 27.7 ± 0.2
G-6-P 12.8 ± 0.2a 10.9 ± 0.2a 15.1 ± 0.7a 9.1 ± 0.2a 22.5 ± 0.4b 28.8 ± 0.4a
Theoretical 10.9 ± 0.2d 10.2 ± 0.2f 17.7 ± 0.7f 9.5 ± 0.2 22.3 ± 0.3 28.4 ± 0.3

Significant difference between experimental values and values for protein interaction without sugar or metabolite (PPARα and L-FABP); aP < 0.001, bP < 0.01, cP < 0.05. Significant difference between predicted values for protein mixtures with sugar or metabolite assuming no protein interaction (theoretical) and experimental values; dP < 0.001, eP < 0.01, fP < 0.05, n = 4–8. G-1-P, glucose-1-phosphate; G-6-P, glucose-6-phosphate; L-FABP, liver fatty acid binding protein; PPAR, peroxisome proliferator-activated receptor.