Table 2.
[α-32P] labeled nucleotide used for production of tRNA transcript | Nuclease | Position of methylation tested | mole of m1A per tRNA |
|||
---|---|---|---|---|---|---|
TtTrmI | PabTrmI | H78YPabTrmI | ||||
PabtRNAAsp | ATP | P1 | all A | 0.85 ± 0.05 | 1.78 ± 0.19 | 0.9 ± 0.05 |
UTP | T2 | A59 | 0 | 0 | 0 | |
A59G PabtRNAAsp | ATP | P1 | all A | 0.8 ± 0.05 | 1.05 ± 0.05 | 0.85 ± 0.05 |
ATP | T2 | A57 | <1% | 0.85 ± 0.15 | 0.70 ± 0.10 | |
GTP | T2 | A58 | 0.7 ± 0.15 | <5% | <1% |
aRadiolabeled tRNA transcripts were incubated in the presence of enzyme, then digested by nucleases P1 or T2 to test the methylation of adenine at positions 57, 58 and 59. The resulting nucleotides were analyzed by 2D–TLC on cellulose plates and autoradiography (Supplementary Figure S3).