Table 4.
MM/PBSA analysis of the relative binding affinities [kcal mol−1] of compound 15 in the X-ray-like binding mode B and the alternative pose A.[a]
Mode | ΔGele | ΔGSAS | ΔGvdW | ΔΔGint | ΔΔGbind |
---|---|---|---|---|---|
Alternative | 11.0 (ε = 2) | −1.7 | −39.9 | 3.5 | −2.7 |
(A) | 2.6 (ε = 4) | ||||
X-ray-like | 10.9 (ε = 2) | −1.8 | −33.5 | 0.0 | 0.0 |
(B) | 2.6 (ε = 4) |
Poses shown in Figure 5.