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. Author manuscript; available in PMC: 2010 Oct 12.
Published in final edited form as: Appl Soft Comput. 2004 Feb 1;4(1):79–86. doi: 10.1016/j.asoc.2003.08.003

Table 5. Penetrance values for combinations of genotypes from five SNPs exhibiting interactions in the absence of independent main effects.

CC Cc cc
AA Aa aa AA Aa aa AA Aa aa
EE DD BB 0.6 0.6 0.0 0.1 1.0 1.0 0.1 1.0 0.0
Bb 0.0 0.0 0.0 0.0 0.0 0.0 1.0 0.3 0.9
bb 1.0 0.1 0.0 0.9 1.0 0.0 0.0 0.1 1.0
Dd BB 1.0 1.0 0.0 0.0 1.0 1.0 0.8 0.1 1.0
Bb 0.0 1.0 0.9 0.0 0.0 0.9 0.0 1.0 0.9
bb 1.0 0.1 0.0 0.4 0.9 1.0 1.0 0.9 0.1
dd BB 0.9 0.8 0.4 1.0 0.0 1.0 0.1 0.0 0.0
Bb 0.3 1.0 0.0 1.0 0.8 0.0 0.0 1.0 0.0
bb 1.0 0.9 0.0 0.1 0.0 0.1 0.0 0.1 0.0
Ee DD BB 1.0 0.0 1.0 0.8 0.9 0.0 0.0 0.0 0.0
Bb 0.5 1.0 0.0 0.7 1.0 0.8 1.0 0.1 0.1
bb 1.0 0.0 0.2 0.0 1.0 1.0 0.3 0.0 1.0
Dd BB 0.0 1.0 0.0 0.1 0.0 0.9 0.0 0.9 1.0
Bb 1.0 0.9 0.0 1.0 0.0 1.0 1.0 0.1 1.0
bb 0.0 0.7 1.0 0.9 0.0 0.3 0.1 0.0 0.9
dd BB 1.0 0.9 0.4 0.8 0.1 0.0 1.0 0.1 0.0
Bb 0.2 0.2 0.2 1.0 0.0 0.1 0.9 0.9 0.0
bb 0.0 1.0 0.5 0.0 1.0 0.4 0.9 1.0 0.0
ee DD BB 0.8 1.0 1.0 0.1 1.0 0.9 0.9 1.0 0.1
Bb 0.7 0.0 0.2 0.8 0.0 1.0 0.9 0.1 0.9
bb 0.1 0.0 0.1 1.0 0.2 0.7 0.0 0.4 1.0
Dd BB 0.0 0.0 1.0 0.0 1.0 1.0 0.1 0.0 0.1
Bb 0.9 0.2 0.0 0.0 1.0 0.0 0.1 0.0 0.9
bb 0.0 1.0 1.0 0.3 0.9 0.0 1.0 0.0 1.0
dd BB 0.0 0.1 0.9 0.0 1.0 0.0 1.0 0.8 1.0
Bb 0.6 0.1 0.0 0.0 1.0 0.0 1.0 1.0 0.8
bb 0.1 1.0 1.0 0.0 1.0 0.9 0.0 1.0 1.0