. 2010 Aug 4;48(10):3744–3749. doi: 10.1128/JCM.01171-10

TABLE 1.

For each strain, the results of the optimized MLVA for each of the 7 loci (A6_Cd, B7_Cd, C6_Cd, G8_Cd, E7_Cd, F3_Cd, and H9_Cd)^a

MST isolate no.	Location of isolation (deidentified)	Yr of isolation	MLVA result (no. of tandem repeats for indicated locus)
MST isolate no.	Location of isolation (deidentified)	Yr of isolation	A6_Cd^b	B7_Cd	C6_Cd	E7_Cd	F3_Cd	G8_Cd	H9_Cd
001	A	2008	NA	19	28	8	4	4	2
002	B	2008	NA	18	26	8	4	4	2
003	E	2008	NA	24	34	8	4	4	2
004	E	2008	NA	13	18	6	4	4	2
005	B	2008	NA	15	33	8	4	3	2
006	H	2008	NA	26	27	12	4	4	2
007	GP	2008	NA	17	49	7	4	1	2
008	I	2008	NA	16	32	8	4	4	2
009	J	2008	NA	22	30	8	4	6	2
010	A	2008	NA	16	26	5	4	6	2
011	M	2008	NA	25	25	8	4	4	2
012	T	2008	NA	18	29	5	4	0	2
013	U	2008	NA	21	39	5	4	6	2
014	GP	2008	NA	21	38	8	4	3	2
015	W	2008	NA	21	38	8	4	3	2
016	X	Not supplied	NA	19	39	5	4	4	2
017	GP	2008	NA	21	34	8	4	5	2
018	M	2008	NA	37	36	8	4	4	2
019	AA	Not supplied	NA	6	42	6	4	5	2
020	T	Not supplied	NA	21	32	8	4	3	2
021	E	2008	NA	19	24	5	4	4	2
022	GP	2008	NA	19	32	8	4	3	2
023	AD	2008	NA	19	32	8	4	3	2
024	E	2008	NA	19	38	5	4	5	2
025	E	2008	NA	37	36	8	4	4	2
026	GP	2008	NA	37	36	8	4	4	2
027	GP	2008	NA	37	36	8	4	4	2
028	M	2008	NA	19	38	5	4	5	2
029	AA	Not supplied	NA	21	39	5	4	6	2
030	AH	2008	NA	35	43	5	4	5	2
031	M	2008	NA	19	37	5	4	4	2
032	M	2008	NA	6	43	6	4	5	2
033	GP	2008	NA	21	41	5	4	6	2
034	AI	2008	NA	24	33	8	4	4	2
035	AJ	2008	NA	21	43	5	4	5	2
036	E	2008	NA	24	33	8	4	4	2
037	AJ	2008	NA	21	43	5	4	3	2
038	AI	2008	NA	21	39	8	4	3	2
039	AK	2008	NA	19	24	5	4	4	2
040	AI	2008	NA	24	33	8	4	4	2
041	AK	2008	NA	20	45	5	4	0	2
042	M	2008	NA	17	33	8	4	4	2
043	M	2008	NA	24	33	8	4	4	2
044	M	2008	NA	37	36	8	4	4	2
045	K	2008	NA	15	23	8	4	5	2
046	D	Not supplied	NA	18	26	8	4	4	2
047	G	2008	NA	19	32	8	4	8	2
048	G	2008	NA	28	34	8	4	4	2
049	C	2007	NA	20	33	8	4	3	2
050	G	2008	NA	19	24	5	4	4	2
051	AB	2007	NA	6	43	6	4	5	2
052	AC	2007	NA	15	43	7	4	5	2
053	D	2007	NA	6	42	6	4	5	2
054	F	2008	NA	19	39	5	4	5	2
055	Y	2007	NA	29	32	8	4	0	2
056	Y	2007	NA	37	36	8	4	4	2
057	AF	2008	NA	19	38	5	4	5	2
058	L	2007	NA	15	32	8	4	8	2
059	V	2007	NA	21	34	8	4	3	2
060	Z	2007	NA	20	37	5	4	4	2
061	AE	1953	NA	21	38	8	4	3	2
062	AL	Not supplied	NA	24	26	8	4	4	2
063	O	2007	NA	17	43	5	4	4	2
064	S	2008	NA	21	34	8	4	3	2
065	P	Not supplied	NA	35	38	8	4	3	2
066	Q	2008	NA	21	38	8	4	3	2
067	R	2008	NA	21	38	8	4	3	2
068	AL	2006	NA	26	38	12	2	4	8
069	AM	2007	NA	26	33	10	2	4	9
070	AM	2007	NA	26	33	11	2	4	9
071	AL	2007	NA	29	40	9	2	4	8
072	AN	2007	NA	24	41	9	2	4	8
073	AO	2007	NA	25	35	13	2	4	8
074	AP	2007	NA	20	20	12	2	4	8
075	AZ	2006	NA	26	34	11	2	4	8
076	AZ	2006	NA	21	34	12	2	4	9
077	AV	2007	NA	21	37	12	2	4	8
078	BB	2007	NA	31	35	11	2	4	8
079	BQ	2007	NA	21	30	9	2	4	8
080	AQ	2006	NA	23	30	9	2	4	8
081	BE	2006	NA	20	41	12	2	4	8
082	BF	2006	NA	22	31	10	2	4	8
083	BG	2006	NA	24	31	11	2	4	8
084	BE	2007	NA	31	36	7	2	4	8
085	BG	2006	NA	27	31	10	2	4	8
086	BG	2006	NA	23	33	9	2	4	8
087	BG	2006	NA	23	33	9	2	4	8
088	AR	2006	NA	23	30	11	2	4	8
089	AU	2007	NA	25	39	12	2	4	8
090	BA	2006	NA	23	25	11	2	4	8
091	BJ	2006	NA	26	32	10	2	4	8
092	AT	2007	NA	18	52	11	2	4	8
093	BI	2006	NA	27	34	12	2	4	8
094	AY	2007	NA	29	40	9	2	4	8
095	AX	2007	NA	29	40	9	2	4	8
096	AW	2007	NA	26	43	13	2	4	8
097	BC	2006	NA	19	28	10	2	4	8
098	BD	2007	NA	18	32	9	2	4	8
099	BP	2006	NA	23	41	12	2	4	8
100	BK	2007	NA	18	33	10	2	4	8
101	BK	2007	NA	18	33	10	2	4	8
102	AS	2005	NA	18	33	9	2	4	8
103	BL	2006	NA	21	37	9	2	4	8
104	BL	2006	NA	21	37	9	2	4	8
105	BM	2007	NA	23	36	11	2	4	8
106	BN	2007	NA	19	32	9	2	4	8
107	BN	2007	NA	19	32	9	2	4	8
108	BN	2007	NA	13	25	9	2	4	8
109	BN	2007	NA	18	34	4	2	4	8
110	BN	2007	NA	13	32	9	2	4	8
111	BN	2007	NA	18	33	9	2	4	8
112	BN	2007	NA	18	34	4	2	4	8
113	BO	2007	NA	21	37	9	2	4	8
114	BR	2009	NA	8	43	8	4	4	2
115	BR	2009	NA	28	43	8	4	4	2
116	BS	2009	NA	25	33	8	4	6	2
117	BS	2009	NA	21	32	8	4	3	2
118	BS	2009	NA	25	32	8	4	3	2
119	BS	2009	NA	25	32	8	4	3	2
120	BS	2009	NA	24	30	8	4	3	2
121	BS	2009	NA	23	31	8	4	3	2
122	BS	2009	NA	23	32	8	4	3	2
123	BS	2009	NA	24	30	8	4	3	2
124	BS	2009	NA	23	32	8	4	3	2
125	BT	2009	NA	20	45	8	4	4	2
126	BT	2009	NA	20	44	8	4	4	2
127	BT	2009	NA	16	38	8	4	4	2
128	BT	2009	NA	18	40	8	4	5	2
129	BU	2009	NA	21	34	8	4	4	2
130	BU	2009	NA	18	37	8	4	4	2
131	BU	2009	NA	15	35	8	4	4	2
132	BU	2009	NA	16	35	8	4	4	2
133	BU	2009	NA	16	35	8	4	4	2
134	BV	2009	NA	16	39	8	4	3	2
135	BV	2009	NA	15	38	8	4	3	2
136	BV	2009	NA	16	36	8	4	4	2
137	BV	2009	NA	28	38	8	4	5	2
138	BV	2009	NA	21	38	8	4	3	2
139	BV	2009	NA	21	38	8	4	5	2
140	BV	2009	NA	21	38	8	4	5	2
141	BV	2009	NA	15	38	8	4	4	2
142	BV	2009	NA	15	35	8	4	3	2
143	BV	2009	NA	16	38	8	4	5	2
144	BW	2009	NA	16	36	8	4	4	2
145	BW	2009	NA	17	33	8	4	4	2
146	BW	2009	NA	21	38	8	4	4	2
147	BW	2009	NA	20	37	8	4	4	2
148	BW	2009	NA	17	34	8	4	4	2
149	BW	2009	NA	23	34	8	4	4	2
150	BW	2009	NA	11	35	8	4	4	2
151	BX	2009	NA	8	35	8	4	1	2
152	BX	2009	NA	18	33	8	4	6	2
153	BX	2009	NA	18	33	8	4	4	2
154	BX	2009	NA	18	32	8	4	4	2
155	BX	2009	NA	20	33	8	4	3	2
156	BX	2009	NA	18	33	8	4	3	2
157	BX	2009	NA	8	35	8	4	6	2
158	BX	2009	NA	12	34	8	4	3	2

All strains have an isolate number which corresponds to the number used in the MST (Fig. 1). Geographical locations correspond as follows: Northern Ireland, 1 to 44; Yorkshire and Humber, 45 to 53; southwest England, 54 to 57; northwest England, 58 to 62; eastern England, 63 and 64; Ireland, 65 to 67; North Holland, 68 to 76; South Holland, 77 to 79; Utrecht, 80 to 87; Gelderland, 88 to 91; Brabant, 92 and 93; Groningen, 94 and 95; Friesland, 96; Flevoland, 97; Limburg, 98; Overijssel, 99 to 101; Belgium, 102. Porcine strains are numbered 103 to 158. For each strain, a deidentified location (institute or pig farm) of isolation, year of isolation, and MLVA results for each locus are described.

NA, not applicable.