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. 2010 Oct 4;191(1):75–86. doi: 10.1083/jcb.201004030

Table II.

Calculated parameters derived from FRAP measurements in BAC HeLa and E3 U2-OS cell lines

Proteins Nucleoplasm Splicing factor compartments E3 gene loci
Df DRB koff nt koff isog Df isog Df DRB kofwnt koff E3 gene loci
µm2s−1 s−1 s−1 µm2s−1 µm2s−1 s−1 s−1
U1-70Kab 0.27 ± 0.02 1.57 ± 0.21 0.058 ± 0.007 NA 0.33 ± 0.05 1.07 ± 0.26 NA
U2A′ab 0.56 ± 0.05 0.062 ± 0.005 0.047 ± 0.006 NA 0.17 ± 0.02 0.050 ± 0.08 NA
hPrp31ab 0.55 ± 0.03 1.36 ± 0.30 0.63 ± 0.26 NA 0.24 ± 0.03 0.055 ± 0.005 NA
hPrp4ab 0.47 ± 0.08 1.55 ± 0.13 0.90 ± 0.23 NA 0.32 ± 0.04 0.048 ± 0.007 NA
hPrp8ab 0.27 ± 0.02 0.037 ± 0.004 NA 0.40 ± 0.02 0.10 ± 0.04 0.035 ± 0.005 NA
Snu114ab 0.26 ± 0.03 0.032 ± 0.006 NA 0.27 ± 0.03 0.19 ± 0.02 0.038 ± 0.007 NA
U1-70Kac 0.50 ± 0.05 1.88 ± 0.15 ND ND ND ND 0.112 ± 0.010
U2B″c 0.61 ± 0.07 0.064 ± 0.005 ND ND ND ND 0.056 ± 0.009
hPrp4c 0.75 ± 0.08 1.51 ± 0.20 ND ND ND ND 0.043 ± 0.006
hPrp8ac 0.37 ± 0.03 0.040 ± 0.003 ND ND ND ND 0.030 ± 0.002

NA, not applicable. Diffusion coefficients Df FRAP DRB were calculated from fits of the FRAP curves measured in the nucleoplasm and the splicing factor compartments in DRB-treated cells. Dissociation rates koff nt were derived from fits of the FRAP curves measured in the nucleoplasm and splicing factor compartments of nontreated cells. Kinetic parameters koff nucl isog and Df nucl isog were derived from fits of the FRAP curves measured in the nucleoplasm of isoginkgetin-treated cells. Dissociation rates koff E3 gene loci were calculated from fits of the FRAP curves measured at the transcription site of the E3 transgene in doxycycline-treated E3 U2-OS cells. The mean ± SEM is shown.

a

BAC stable cell line.

b

HeLa cells.

c

E3 U2-OS cells.