Table 3. Sequences and abundance of top ten predicted novel miRNA candidates in five small RNA libraries.
Name | Sequence | Counts/Mb | Corresponding miRNA name | ||||
ZJ | ZJ-COLD | ZJ-DJ3 | CAN | USA | |||
Candi-1 | UGAGAUCAAAGGUUUUAGGGUAU | 5,238.1 | 11,375.5 | 8,093.8 | 6,406.6 | 7,766.1 | bxy-novel-18 |
Candi-2 | UGACUAGAUCCAUACUCAGCU | 2,216.1 | 1,843.6 | 5,488.6 | 1,859.0 | 2,535.7 | bxy-miR-45 |
Candi-3 | AACCCGUAGAAUUUACUUUCGUU | 722.2 | 76.4 | 368.8 | 853.4 | 676.0 | bxy-novel-02 |
Candi-4 | UGAGGUAUUGUCAUCAUGUCUAU | 433.9 | 550.4 | 291.4 | 455.7 | 509.3 | bxy-novel-11 |
Candi-5 | UGAGAUCAGACUAGACUCAUCU | 426.8 | 160.7 | 111.4 | 412.7 | 407.6 | bxy-novel-13 |
Candi-6 | UGAGAUCAUAGAUUUAGGGUAC | 206.3 | 392.4 | 115.8 | 241.9 | 272.6 | bxy-novel-07 |
Candi-7 | UGAGAUCAUAGAUUUAGGGUA | 177.2 | 434.3 | 58.9 | 201.6 | 218.1 | -- |
Candi-8 | UCCCUGAGACUAUAACUGU | 172.0 | 128.8 | 10.1 | 179.8 | 141.2 | -- |
Candi-9 | UCCCUGAGACUAUAACUGUGA | 148.3 | 75.0 | 113.5 | 166.8 | 135.1 | -- |
Candi-10 | UGAGAUCGGUUCGGAUUCGUCA | 136.2 | 656.0 | 93.4 | 122.0 | 202.0 | -- |