Table 2.
G+C contents of the rag locus, homologous genes, and function-similar sequences
Strains | Encode protein | T (%) | C (%) | A (%) | G (%) | G+C (%) |
---|---|---|---|---|---|---|
Flavobacterium sp. | TonB-dependent receptor | 31.7 | 16.4 | 34.9 | 16.9 | 33.3 |
Croceibacter sp. | TonB | 35.1 | 20.4 | 29.2 | 15.3 | 35.7 |
H. influenza | TBP2 | 36.3 | 18.5 | 27.4 | 17.8 | 36.3 |
Haemophilus | TonB-dependent receptor | 34.4 | 20 | 27.4 | 18.2 | 38.2 |
Capnocytophaga sp. | TonB-dependent receptor | 31.3 | 20.2 | 28.8 | 20.7 | 40.9 |
E. coli | orfH | 25.8 | 17.6 | 32.5 | 24.2 | 41.8 |
V. cholerae | IS1358 | 27.9 | 17.9 | 29.9 | 24.3 | 42.2 |
P. gingivalis | orf3 | 31 | 20.8 | 25.8 | 22.3 | 43.1 |
P. gingivalis | RagB | 29.4 | 19.5 | 27 | 23.9 | 43.4 |
Bacteroides sp. | SusC | 28.0 | 23.5 | 26.5 | 22.0 | 43.5 |
P. gingivalis | RagA | 29 | 20.5 | 26.7 | 23.9 | 44.4 |
Parabacteroides | TonB-dependent receptor | 27 | 19.8 | 26.9 | 26.3 | 46.1 |
N. meningitidis | LBP2 | 31.5 | 25.4 | 22.1 | 20.9 | 46.3 |
P. gingivalis | hmuR | 26.2 | 24.8 | 27.2 | 21.9 | 46.7 |
N. meningitidis | TBP2 | 20.2 | 23 | 32.4 | 24.4 | 47.4 |
P. gingivalis | hemR | 26.8 | 25.2 | 25.8 | 22.2 | 47.4 |
P. gingivalis | tla | 24.2 | 24.6 | 26.7 | 24.4 | 49 |
E. coli | CirA | 21.5 | 24.9 | 26.2 | 27.3 | 52.2 |
Robiginitalea sp. | TonB | 26.7 | 29.6 | 20.1 | 23.5 | 53.1 |
Salmonella enterica | CirA | 20.8 | 25.8 | 24.6 | 28.8 | 54.6 |