Table 3. Variable number tandem repeat sizes for Bacillus anthracis isolates, Kazakhstan*.
Kazakhstan genotype no. | MLVA group† | MLVA genotype | vrrA | vrrB1 | vrrB2 | vrrC1 | vrrC2 | CG-3 | pX01 | pX02 |
---|---|---|---|---|---|---|---|---|---|---|
1 | A1.a | Gt-13 (4) | 313 | 229 | 162 | 613 | 604 | 153 | 132 | 137 |
2 | A1.a | Novel | 313 | 229 | 162 | 613 | 604 | 153 | 135 | 137 |
3 | A1.a | Novel | 313 | 229 | 162 | 613 | 604 | 153 | 129 | 139 |
4 | A1.a | Novel | 313 | 229 | 162 | 613 | 604 | 153 | 129 | 137 |
5 | A1.a | Novel | 313 | 229 | 162 | 613 | 604 | 153 | 138 | 137 |
6 | A1.a | Gt-6 (4) | 301 | 229 | 162 | 613 | 604 | 153 | 126 | 137 |
7 | A1.a | Gt-3 (4) | 313 | 229 | 162 | 613 | 604 | 153 | 126 | 137 |
8 | A1.a | Novel | 313 | 229 | 162 | 613 | 604 | 153 | 132 | 139 |
9 | Novel | Novel | 325 | 229 | 162 | 613 | 604 | 158 | 132 | 137 |
10 | A4 | Novel | 313 | 229 | 162 | 538 | 604 | 158 | 126 | 137 |
11 | Novel | Novel | 313 | 229 | 162 | 583 | 532 | 153 | 129 | 141 |
12 | A3b | Novel | 313 | 229 | 162 | 583 | 532 | 158 | 126 | 139 |
*Raw allele sizes were determined by electrophoresis on the ABI 310 (Applied Biosystems, Inc., Foster City, CA, USA); sizes were compared to control variable number tandem repeats and corrected to the sizes reported by Keim et al. (4). †MLVA, multilocus variable number tandem repeat. MLVA group determined by unweighted pair group method arithmetic mean clustering with the diverse 89 genotypes described by Keim et al. (4).