Table 1. Summary of crystal parameters and data-collection and refinement statistics for SSO2064 (PDB code 3irb).
Values in parentheses are for the highest resolution shell.
λ1 MADSe | λ2 MADSe | λ3 MADSe | |
---|---|---|---|
Data collection | |||
Space group | P4122 | ||
Unit-cell parameters (Å) | a = b = 75.17, c = 115.40 | ||
Wavelength (Å) | 0.9184 | 0.9794 | 0.9792 |
Resolution range (Å) | 26.9–1.80 (1.85–1.80) | 26.9–1.80 (1.85–1.80) | 29.1–1.91 (1.91–1.96) |
No. of observations | 221293 | 220707 | 170456 |
No. of unique reflections | 31362 | 31365 | 26484 |
Completeness (%) | 99.8 (99.3) | 99.8 (99.3) | 99.8 (99.9) |
Mean I/σ(I) | 13.2 (2.6) | 13.0 (2.6) | 12.0 (2.0) |
Rmerge† on I (%) | 8.8 (87.3) | 8.8 (87.2) | 12.9 (117.7) |
Rmeas‡ on I (%) | 9.5 (94.2) | 9.5 (94.1) | 14.0 (127.7) |
Model and refinement statistics | |||
Resolution range (Å) | 26.9–1.80 | ||
No. of reflections (total) | 31317§ | ||
No. of reflections (test) | 1560 | ||
Completeness (%) | 99.8 | ||
Data set used in refinement | λ1 MADSe | ||
Cutoff criterion | |F| > 0 | ||
Rcryst¶ | 0.169 | ||
Rfree†† | 0.200 | ||
Stereochemical parameters | |||
Restraints (r.m.s.d. observed) | |||
Bond angles (°) | 1.41 | ||
Bond lengths (Å) | 0.014 | ||
Average isotropic B value (Å2) | 29.4 | ||
ESU‡‡ based on Rfree | 0.105 | ||
No. of protein residues/atoms | 271/2187 | ||
No. of water/other solvent molecules and ions | 201/10§§ |
R
merge =
.
R
meas =
(Diederichs & Karplus, 1997 ▶).
Typically, the number of unique reflections used in refinement is slightly less than the total number that were integrated and scaled. Reflections are excluded owing to systematic absences, negative intensities and rounding errors in the resolution limits and unit-cell parameters.
R
cryst =
, where F
calc and F
obs are the calculated and observed structure-factor amplitudes, respectively.
R free is the same as R cryst, but for 5.0% of the total reflections chosen at random and omitted from refinement.
Estimated overall coordinate error (Collaborative Computational Project, Number 4, 1994 ▶; Cruickshank, 1999 ▶).
Two Zn ions, two acetates and six sulfates.