Table 3.
Deduced VP7 amino acid (bottom left) and nucleotide (upper right) percentage identity of Ghanaian G10 strains to selected human and animal rotavirus G10 strains
| Strain | %Identity with strain | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| 86 | 402 | 1784CI/99 | 3008CM | Mc35 | I321 | R239 | *China | *B233 | *Thai | |
| 86 | 99.9 | 98.7 | 97.6 | 88.9 | 83.8 | 85.0 | 85.3 | 85.8 | 85.6 | |
| 402 | 99.7 | 98.6 | 97.5 | 88.8 | 83.7 | 85.0 | 85.2 | 85.7 | 85.5 | |
| 1784CI/99 | 96.0 | 97.3 | 98.8 | 89.8 | 83.8 | 85.4 | 85.9 | 86.3 | 86.1 | |
| 3008CM | 94.6 | 95.9 | 98.5 | 88.6 | 82.9 | 84.6 | 84.6 | 85.3 | 85.3 | |
| Mc35 | 93.0 | 94.2 | 96.9 | 95.4 | 83.5 | 84.7 | 95.1 | 85.7 | 85.9 | |
| I321 | 89.6 | 90.8 | 92.3 | 90.8 | 89.6 | 84.1 | 89.6 | 91.1 | 87.5 | |
| R239 | 91.1 | 92.3 | 94.4 | 92.8 | 92.2 | 92.2 | 93.1 | 93.1 | 86.1 | |
| *China | 91.9 | 93.2 | 95.7 | 94.4 | 86.7 | 83. | 86.0 | 82.1 | 86.4 | |
| *B223 | 91.6 | 93.2 | 94.5 | 92.9 | 82.3 | 88.6 | 85.2 | 82.1 | 92.3 | |
| *Thai | 91.1 | 92.8 | 95.1 | 93.6 | 92.9 | 92.0 | 94.4 | 92.9 | 94.4 | |
The GenBank accession numbers of selected G10 strains are: 86/Hu/Ghana (AY843333); 402/Hu/Ghana (AY843332); 1784CI/99/Hu/Cote d’Ivoire (AY816181); 3008CM/Hu/Cameroon (AY816182); China/lamb/China (L11602); Mc35/Hu/Thailand (D14033); B223/Bo/US (X57852); I321/Hu/India (L07658); R239/Hu/Brazil (AY855063); Thai/Po/Thailand (U35850).
*
= animal